Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM56-RWDD3S4R434 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TMEM56-RWDD3S4R434 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM56-RWDD3S4R434 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM56-RWDD3S4R434 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
TMEM56-RWDD3S4R434 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
TMEM56-RWDD3S4R434 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56-RWDD3S4R434 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56-RWDD3S4R434 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56-RWDD3S4R434 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.01■□□□□ 0.79
TMEM56-RWDD3S4R434 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56-RWDD3S4R434 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56-RWDD3S4R434 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56-RWDD3S4R434 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56-RWDD3S4R434 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56-RWDD3S4R434 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20■□□□□ 0.79
TMEM56-RWDD3S4R434 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20■□□□□ 0.79
TMEM56-RWDD3S4R434 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.99■□□□□ 0.79
TMEM56-RWDD3S4R434 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM56-RWDD3S4R434 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.99■□□□□ 0.79
TMEM56-RWDD3S4R434 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM56-RWDD3S4R434 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM56-RWDD3S4R434 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM56-RWDD3S4R434 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56-RWDD3S4R434 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM56-RWDD3S4R434 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56-RWDD3S4R434 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56-RWDD3S4R434 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.98■□□□□ 0.79
TMEM56-RWDD3S4R434 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56-RWDD3S4R434 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56-RWDD3S4R434 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM56-RWDD3S4R434 DUX4L28-201ENST00000623687 678 ntBASIC19.97■□□□□ 0.79
TMEM56-RWDD3S4R434 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM56-RWDD3S4R434 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM56-RWDD3S4R434 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM56-RWDD3S4R434 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM56-RWDD3S4R434 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM56-RWDD3S4R434 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM56-RWDD3S4R434 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM56-RWDD3S4R434 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM56-RWDD3S4R434 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56-RWDD3S4R434 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TMEM56-RWDD3S4R434 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56-RWDD3S4R434 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56-RWDD3S4R434 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM56-RWDD3S4R434 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM56-RWDD3S4R434 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM56-RWDD3S4R434 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM56-RWDD3S4R434 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM56-RWDD3S4R434 AC022211.4-201ENST00000625094 2161 ntBASIC19.93■□□□□ 0.78
TMEM56-RWDD3S4R434 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM56-RWDD3S4R434 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM56-RWDD3S4R434 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM56-RWDD3S4R434 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
TMEM56-RWDD3S4R434 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM56-RWDD3S4R434 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM56-RWDD3S4R434 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.92■□□□□ 0.78
TMEM56-RWDD3S4R434 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM56-RWDD3S4R434 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM56-RWDD3S4R434 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM56-RWDD3S4R434 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TMEM56-RWDD3S4R434 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56-RWDD3S4R434 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56-RWDD3S4R434 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56-RWDD3S4R434 AL139125.2-201ENST00000623134 1869 ntBASIC19.91■□□□□ 0.78
TMEM56-RWDD3S4R434 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56-RWDD3S4R434 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.91■□□□□ 0.78
TMEM56-RWDD3S4R434 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56-RWDD3S4R434 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56-RWDD3S4R434 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56-RWDD3S4R434 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM56-RWDD3S4R434 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.91■□□□□ 0.78
TMEM56-RWDD3S4R434 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
TMEM56-RWDD3S4R434 AC138932.3-201ENST00000567634 1902 ntBASIC19.9■□□□□ 0.78
TMEM56-RWDD3S4R434 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.9■□□□□ 0.78
TMEM56-RWDD3S4R434 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.9■□□□□ 0.78
TMEM56-RWDD3S4R434 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.9■□□□□ 0.78
TMEM56-RWDD3S4R434 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM56-RWDD3S4R434 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TMEM56-RWDD3S4R434 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM56-RWDD3S4R434 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
TMEM56-RWDD3S4R434 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM56-RWDD3S4R434 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM56-RWDD3S4R434 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM56-RWDD3S4R434 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.89■□□□□ 0.77
TMEM56-RWDD3S4R434 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM56-RWDD3S4R434 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.88■□□□□ 0.77
TMEM56-RWDD3S4R434 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.88■□□□□ 0.77
TMEM56-RWDD3S4R434 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM56-RWDD3S4R434 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.88■□□□□ 0.77
TMEM56-RWDD3S4R434 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM56-RWDD3S4R434 MIR3665-201ENST00000578708 105 ntBASIC19.88■□□□□ 0.77
TMEM56-RWDD3S4R434 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM56-RWDD3S4R434 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM56-RWDD3S4R434 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.88■□□□□ 0.77
TMEM56-RWDD3S4R434 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM56-RWDD3S4R434 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.88■□□□□ 0.77
TMEM56-RWDD3S4R434 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM56-RWDD3S4R434 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM56-RWDD3S4R434 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms