Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.01■□□□□ 0.95
MRPS28Q9Y2Q9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
MRPS28Q9Y2Q9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRPS28Q9Y2Q9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MRPS28Q9Y2Q9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MRPS28Q9Y2Q9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MRPS28Q9Y2Q9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
MRPS28Q9Y2Q9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
MRPS28Q9Y2Q9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21■□□□□ 0.95
MRPS28Q9Y2Q9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRPS28Q9Y2Q9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRPS28Q9Y2Q9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRPS28Q9Y2Q9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRPS28Q9Y2Q9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.99■□□□□ 0.95
MRPS28Q9Y2Q9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
MRPS28Q9Y2Q9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MRPS28Q9Y2Q9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRPS28Q9Y2Q9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRPS28Q9Y2Q9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRPS28Q9Y2Q9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MRPS28Q9Y2Q9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.98■□□□□ 0.95
MRPS28Q9Y2Q9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
MRPS28Q9Y2Q9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRPS28Q9Y2Q9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MRPS28Q9Y2Q9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRPS28Q9Y2Q9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPS28Q9Y2Q9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.97■□□□□ 0.95
MRPS28Q9Y2Q9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPS28Q9Y2Q9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPS28Q9Y2Q9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MRPS28Q9Y2Q9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPS28Q9Y2Q9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.96■□□□□ 0.95
MRPS28Q9Y2Q9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.96■□□□□ 0.95
MRPS28Q9Y2Q9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPS28Q9Y2Q9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPS28Q9Y2Q9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.95■□□□□ 0.94
MRPS28Q9Y2Q9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPS28Q9Y2Q9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MRPS28Q9Y2Q9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRPS28Q9Y2Q9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRPS28Q9Y2Q9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MRPS28Q9Y2Q9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRPS28Q9Y2Q9 AC010501.1-201ENST00000606270 1962 ntBASIC20.94■□□□□ 0.94
MRPS28Q9Y2Q9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MRPS28Q9Y2Q9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRPS28Q9Y2Q9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
MRPS28Q9Y2Q9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
MRPS28Q9Y2Q9 ERN1-208ENST00000606895 2068 ntBASIC20.93■□□□□ 0.94
MRPS28Q9Y2Q9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MRPS28Q9Y2Q9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.93■□□□□ 0.94
MRPS28Q9Y2Q9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.93■□□□□ 0.94
MRPS28Q9Y2Q9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MRPS28Q9Y2Q9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.93■□□□□ 0.94
MRPS28Q9Y2Q9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRPS28Q9Y2Q9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRPS28Q9Y2Q9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRPS28Q9Y2Q9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.92■□□□□ 0.94
MRPS28Q9Y2Q9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.92■□□□□ 0.94
MRPS28Q9Y2Q9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRPS28Q9Y2Q9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.92■□□□□ 0.94
MRPS28Q9Y2Q9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.92■□□□□ 0.94
MRPS28Q9Y2Q9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MRPS28Q9Y2Q9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MRPS28Q9Y2Q9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MRPS28Q9Y2Q9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.91■□□□□ 0.94
MRPS28Q9Y2Q9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
MRPS28Q9Y2Q9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
MRPS28Q9Y2Q9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MRPS28Q9Y2Q9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.9■□□□□ 0.94
MRPS28Q9Y2Q9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.9■□□□□ 0.94
MRPS28Q9Y2Q9 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.9■□□□□ 0.94
MRPS28Q9Y2Q9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
MRPS28Q9Y2Q9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
MRPS28Q9Y2Q9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MRPS28Q9Y2Q9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MRPS28Q9Y2Q9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
MRPS28Q9Y2Q9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.89■□□□□ 0.93
MRPS28Q9Y2Q9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MRPS28Q9Y2Q9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MRPS28Q9Y2Q9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MRPS28Q9Y2Q9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
MRPS28Q9Y2Q9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
MRPS28Q9Y2Q9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
MRPS28Q9Y2Q9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
MRPS28Q9Y2Q9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MRPS28Q9Y2Q9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
MRPS28Q9Y2Q9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MRPS28Q9Y2Q9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
MRPS28Q9Y2Q9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.87■□□□□ 0.93
MRPS28Q9Y2Q9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.87■□□□□ 0.93
MRPS28Q9Y2Q9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.87■□□□□ 0.93
MRPS28Q9Y2Q9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MRPS28Q9Y2Q9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MRPS28Q9Y2Q9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MRPS28Q9Y2Q9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.86■□□□□ 0.93
MRPS28Q9Y2Q9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
MRPS28Q9Y2Q9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MRPS28Q9Y2Q9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MRPS28Q9Y2Q9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.85■□□□□ 0.93
MRPS28Q9Y2Q9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms