Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXJ3Q9UPW0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FOXJ3Q9UPW0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXJ3Q9UPW0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FOXJ3Q9UPW0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.33■■□□□ 1.01
FOXJ3Q9UPW0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.33■■□□□ 1.01
FOXJ3Q9UPW0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FOXJ3Q9UPW0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FOXJ3Q9UPW0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
FOXJ3Q9UPW0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.33■■□□□ 1
FOXJ3Q9UPW0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.33■■□□□ 1
FOXJ3Q9UPW0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
FOXJ3Q9UPW0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
FOXJ3Q9UPW0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.33■■□□□ 1
FOXJ3Q9UPW0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.33■■□□□ 1
FOXJ3Q9UPW0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
FOXJ3Q9UPW0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
FOXJ3Q9UPW0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.31■■□□□ 1
FOXJ3Q9UPW0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.31■■□□□ 1
FOXJ3Q9UPW0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
FOXJ3Q9UPW0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
FOXJ3Q9UPW0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXJ3Q9UPW0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXJ3Q9UPW0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXJ3Q9UPW0 MIR7108-201ENST00000614319 87 ntBASIC21.3■■□□□ 1
FOXJ3Q9UPW0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.3■■□□□ 1
FOXJ3Q9UPW0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXJ3Q9UPW0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.29■■□□□ 1
FOXJ3Q9UPW0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXJ3Q9UPW0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXJ3Q9UPW0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXJ3Q9UPW0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
FOXJ3Q9UPW0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXJ3Q9UPW0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
FOXJ3Q9UPW0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXJ3Q9UPW0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
FOXJ3Q9UPW0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXJ3Q9UPW0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXJ3Q9UPW0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
FOXJ3Q9UPW0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXJ3Q9UPW0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXJ3Q9UPW0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
FOXJ3Q9UPW0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXJ3Q9UPW0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXJ3Q9UPW0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXJ3Q9UPW0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXJ3Q9UPW0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
FOXJ3Q9UPW0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXJ3Q9UPW0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXJ3Q9UPW0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
FOXJ3Q9UPW0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXJ3Q9UPW0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXJ3Q9UPW0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXJ3Q9UPW0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXJ3Q9UPW0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.25■□□□□ 0.99
FOXJ3Q9UPW0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXJ3Q9UPW0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXJ3Q9UPW0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
FOXJ3Q9UPW0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXJ3Q9UPW0 ERN1-208ENST00000606895 2068 ntBASIC21.24■□□□□ 0.99
FOXJ3Q9UPW0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXJ3Q9UPW0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
FOXJ3Q9UPW0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXJ3Q9UPW0 AC010501.1-201ENST00000606270 1962 ntBASIC21.23■□□□□ 0.99
FOXJ3Q9UPW0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
FOXJ3Q9UPW0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
FOXJ3Q9UPW0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXJ3Q9UPW0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXJ3Q9UPW0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXJ3Q9UPW0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXJ3Q9UPW0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
FOXJ3Q9UPW0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXJ3Q9UPW0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXJ3Q9UPW0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.21■□□□□ 0.99
FOXJ3Q9UPW0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.21■□□□□ 0.99
FOXJ3Q9UPW0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXJ3Q9UPW0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXJ3Q9UPW0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXJ3Q9UPW0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
FOXJ3Q9UPW0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXJ3Q9UPW0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXJ3Q9UPW0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXJ3Q9UPW0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXJ3Q9UPW0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXJ3Q9UPW0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.19■□□□□ 0.98
FOXJ3Q9UPW0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXJ3Q9UPW0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXJ3Q9UPW0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXJ3Q9UPW0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXJ3Q9UPW0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXJ3Q9UPW0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
FOXJ3Q9UPW0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXJ3Q9UPW0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXJ3Q9UPW0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXJ3Q9UPW0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.18■□□□□ 0.98
FOXJ3Q9UPW0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.18■□□□□ 0.98
FOXJ3Q9UPW0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXJ3Q9UPW0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXJ3Q9UPW0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXJ3Q9UPW0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms