Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCF1Q9UBD9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.94■■□□□ 1.1
CLCF1Q9UBD9 TSPY13P-201ENST00000338964 914 ntBASIC21.94■■□□□ 1.1
CLCF1Q9UBD9 ATP5G2P3-201ENST00000429083 425 ntBASIC21.94■■□□□ 1.1
CLCF1Q9UBD9 AC129492.7-201ENST00000622992 756 ntBASIC21.94■■□□□ 1.1
CLCF1Q9UBD9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCF1Q9UBD9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.94■■□□□ 1.1
CLCF1Q9UBD9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
CLCF1Q9UBD9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCF1Q9UBD9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.94■■□□□ 1.1
CLCF1Q9UBD9 BX255925.1-201ENST00000566954 1854 ntBASIC21.93■■□□□ 1.1
CLCF1Q9UBD9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.93■■□□□ 1.1
CLCF1Q9UBD9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CLCF1Q9UBD9 AL449106.1-201ENST00000608517 1980 ntBASIC21.93■■□□□ 1.1
CLCF1Q9UBD9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCF1Q9UBD9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CLCF1Q9UBD9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
CLCF1Q9UBD9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CLCF1Q9UBD9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCF1Q9UBD9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCF1Q9UBD9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCF1Q9UBD9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCF1Q9UBD9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CLCF1Q9UBD9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CLCF1Q9UBD9 AC142086.6-201ENST00000621154 1765 ntBASIC21.91■■□□□ 1.1
CLCF1Q9UBD9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCF1Q9UBD9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCF1Q9UBD9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCF1Q9UBD9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCF1Q9UBD9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCF1Q9UBD9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLCF1Q9UBD9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.9■■□□□ 1.1
CLCF1Q9UBD9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCF1Q9UBD9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.89■■□□□ 1.1
CLCF1Q9UBD9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLCF1Q9UBD9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CLCF1Q9UBD9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLCF1Q9UBD9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CLCF1Q9UBD9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCF1Q9UBD9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLCF1Q9UBD9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLCF1Q9UBD9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.88■■□□□ 1.09
CLCF1Q9UBD9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CLCF1Q9UBD9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCF1Q9UBD9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCF1Q9UBD9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.87■■□□□ 1.09
CLCF1Q9UBD9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CLCF1Q9UBD9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCF1Q9UBD9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
CLCF1Q9UBD9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.87■■□□□ 1.09
CLCF1Q9UBD9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCF1Q9UBD9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCF1Q9UBD9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.86■■□□□ 1.09
CLCF1Q9UBD9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CLCF1Q9UBD9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.86■■□□□ 1.09
CLCF1Q9UBD9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CLCF1Q9UBD9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCF1Q9UBD9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLCF1Q9UBD9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CLCF1Q9UBD9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.85■■□□□ 1.09
CLCF1Q9UBD9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCF1Q9UBD9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLCF1Q9UBD9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLCF1Q9UBD9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CLCF1Q9UBD9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLCF1Q9UBD9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCF1Q9UBD9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.84■■□□□ 1.09
CLCF1Q9UBD9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.84■■□□□ 1.09
CLCF1Q9UBD9 DUX4L9-201ENST00000449051 1259 ntBASIC21.84■■□□□ 1.09
CLCF1Q9UBD9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.84■■□□□ 1.09
CLCF1Q9UBD9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLCF1Q9UBD9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLCF1Q9UBD9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.83■■□□□ 1.09
CLCF1Q9UBD9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCF1Q9UBD9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCF1Q9UBD9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCF1Q9UBD9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CLCF1Q9UBD9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CLCF1Q9UBD9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.82■■□□□ 1.08
CLCF1Q9UBD9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCF1Q9UBD9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.82■■□□□ 1.08
CLCF1Q9UBD9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCF1Q9UBD9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCF1Q9UBD9 SPCS2P3-201ENST00000500401 656 ntBASIC21.82■■□□□ 1.08
CLCF1Q9UBD9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.82■■□□□ 1.08
CLCF1Q9UBD9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCF1Q9UBD9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCF1Q9UBD9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.81■■□□□ 1.08
CLCF1Q9UBD9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCF1Q9UBD9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCF1Q9UBD9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CLCF1Q9UBD9 DUX4L18-201ENST00000553347 1267 ntBASIC21.81■■□□□ 1.08
CLCF1Q9UBD9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLCF1Q9UBD9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCF1Q9UBD9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.8■■□□□ 1.08
CLCF1Q9UBD9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLCF1Q9UBD9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CLCF1Q9UBD9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCF1Q9UBD9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCF1Q9UBD9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms