Protein–RNA interactions for Protein: Q9P287

BCCIP, BRCA2 and CDKN1A-interacting protein, humanhuman

Known RBP eCLIP

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIPQ9P287 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.338e-6■□□□□ 10.9
BCCIPQ9P287 CTBP1-212ENST00000513420 704 ntTSL 315.57■□□□□ 0.088e-6■□□□□ 10.9
BCCIPQ9P287 CTBP1-213ENST00000514210 856 ntTSL 215.33■□□□□ 0.048e-6■□□□□ 10.9
BCCIPQ9P287 NPM1-211ENST00000523622 247 ntTSL 39.49□□□□□ -0.898e-6■□□□□ 10.9
BCCIPQ9P287 NPM1-208ENST00000521672 597 ntTSL 58.39□□□□□ -1.078e-6■□□□□ 10.9
BCCIPQ9P287 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.088e-6■□□□□ 10.9
BCCIPQ9P287 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.61□□□□□ -1.198e-6■□□□□ 10.9
BCCIPQ9P287 NPM1-205ENST00000518587 670 ntTSL 27.61□□□□□ -1.198e-6■□□□□ 10.9
BCCIPQ9P287 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.91□□□□□ -1.468e-6■□□□□ 10.9
BCCIPQ9P287 NPM1-210ENST00000523339 268 ntTSL 24.22□□□□□ -1.738e-6■□□□□ 10.9
BCCIPQ9P287 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.11e-6■□□□□ 10.7
BCCIPQ9P287 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.078e-6■□□□□ 10.5
BCCIPQ9P287 GOLGA3-205ENST00000537317 298 ntTSL 315.93■□□□□ 0.148e-6■□□□□ 10.5
BCCIPQ9P287 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.018e-6■□□□□ 10.5
BCCIPQ9P287 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.498e-6■□□□□ 10.5
BCCIPQ9P287 CHFR-219ENST00000541341 581 ntTSL 311.14□□□□□ -0.638e-6■□□□□ 10.5
BCCIPQ9P287 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.352e-6■□□□□ 10.4
BCCIPQ9P287 SKI-204ENST00000508416 252 ntTSL 310.82□□□□□ -0.682e-6■□□□□ 10.4
BCCIPQ9P287 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.05■□□□□ 0.643e-6■□□□□ 10.4
BCCIPQ9P287 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.563e-6■□□□□ 10.4
BCCIPQ9P287 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.54■□□□□ 0.243e-6■□□□□ 10.4
BCCIPQ9P287 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.073e-6■□□□□ 10.4
BCCIPQ9P287 MSI2-214ENST00000581776 493 ntTSL 26.18□□□□□ -1.423e-6■□□□□ 10.4
BCCIPQ9P287 MSI2-212ENST00000579590 452 ntTSL 55.54□□□□□ -1.523e-6■□□□□ 10.4
BCCIPQ9P287 MSI2-215ENST00000582453 496 ntTSL 33.31□□□□□ -1.883e-6■□□□□ 10.4
BCCIPQ9P287 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.132e-7■□□□□ 10.2
BCCIPQ9P287 BCL6-210ENST00000496823 1138 ntTSL 314.14□□□□□ -0.152e-7■□□□□ 10.2
BCCIPQ9P287 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC13.91□□□□□ -0.182e-7■□□□□ 10.2
BCCIPQ9P287 BCL6-209ENST00000480458 342 ntTSL 58.41□□□□□ -1.062e-7■□□□□ 10.2
BCCIPQ9P287 BCL6-207ENST00000470319 526 ntTSL 43.15□□□□□ -1.912e-7■□□□□ 10.2
BCCIPQ9P287 FNDC3B-206ENST00000443501 678 ntTSL 38.71□□□□□ -1.024e-6■□□□□ 10.2
BCCIPQ9P287 FNDC3B-209ENST00000478016 554 ntTSL 45.2□□□□□ -1.584e-6■□□□□ 10.2
BCCIPQ9P287 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.637e-10■□□□□ 10.1
BCCIPQ9P287 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.857e-10■□□□□ 10.1
BCCIPQ9P287 UBE2I-208ENST00000473256 1771 ntTSL 218.6■□□□□ 0.577e-10■□□□□ 10.1
BCCIPQ9P287 UBE2I-218ENST00000568288 501 ntTSL 517.81■□□□□ 0.447e-10■□□□□ 10.1
BCCIPQ9P287 UBE2I-216ENST00000567383 538 ntTSL 417.76■□□□□ 0.437e-10■□□□□ 10.1
BCCIPQ9P287 UBE2I-217ENST00000568209 266 ntTSL 517.44■□□□□ 0.387e-10■□□□□ 10.1
BCCIPQ9P287 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.367e-10■□□□□ 10.1
BCCIPQ9P287 UBE2I-210ENST00000562482 735 ntTSL 216.82■□□□□ 0.287e-10■□□□□ 10.1
BCCIPQ9P287 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.067e-10■□□□□ 10.1
BCCIPQ9P287 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.087e-10■□□□□ 10.1
BCCIPQ9P287 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.117e-10■□□□□ 10.1
BCCIPQ9P287 SKI-202ENST00000478223 294 ntTSL 312.13□□□□□ -0.472e-6■□□□□ 10.1
BCCIPQ9P287 NEAT1_1.1-201ENST00000620348 120 ntBASIC12.06□□□□□ -0.481e-52■□□□□ 9.9
BCCIPQ9P287 KCMF1-204ENST00000456682 661 ntTSL 326.91■■□□□ 1.98e-7■□□□□ 9.9
BCCIPQ9P287 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.78e-7■□□□□ 9.9
BCCIPQ9P287 KCMF1-202ENST00000428691 560 ntTSL 219.13■□□□□ 0.658e-7■□□□□ 9.9
BCCIPQ9P287 EIF3E-203ENST00000518345 558 ntTSL 39.33□□□□□ -0.922e-7■□□□□ 9.9
BCCIPQ9P287 EIF3E-204ENST00000518442 1285 ntTSL 1 (best)9.16□□□□□ -0.942e-7■□□□□ 9.9
BCCIPQ9P287 EIF3E-215ENST00000522445 841 ntTSL 37.75□□□□□ -1.172e-7■□□□□ 9.9
BCCIPQ9P287 EIF3E-211ENST00000521440 746 ntTSL 1 (best)6.8□□□□□ -1.322e-7■□□□□ 9.9
BCCIPQ9P287 EIF3E-202ENST00000518100 687 ntTSL 56.48□□□□□ -1.372e-7■□□□□ 9.9
BCCIPQ9P287 EIF3E-216ENST00000522887 575 ntTSL 46.43□□□□□ -1.382e-7■□□□□ 9.9
BCCIPQ9P287 KCMF1-203ENST00000453448 625 ntTSL 35.87□□□□□ -1.478e-7■□□□□ 9.9
BCCIPQ9P287 EIF3E-209ENST00000519627 697 ntTSL 25.85□□□□□ -1.472e-7■□□□□ 9.9
BCCIPQ9P287 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.56□□□□□ -1.522e-7■□□□□ 9.9
BCCIPQ9P287 EIF3E-205ENST00000518634 545 ntTSL 55.53□□□□□ -1.522e-7■□□□□ 9.9
BCCIPQ9P287 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.652e-7■□□□□ 9.9
BCCIPQ9P287 EIF3E-210ENST00000521297 223 ntTSL 52.76□□□□□ -1.972e-7■□□□□ 9.9
BCCIPQ9P287 MTG1-204ENST00000473735 2212 ntTSL 523.64■■□□□ 1.372e-9■□□□□ 9.7
BCCIPQ9P287 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.94■□□□□ 0.622e-9■□□□□ 9.7
BCCIPQ9P287 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.592e-9■□□□□ 9.7
BCCIPQ9P287 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.382e-9■□□□□ 9.7
BCCIPQ9P287 MTG1-202ENST00000432508 953 ntTSL 216.85■□□□□ 0.292e-9■□□□□ 9.7
BCCIPQ9P287 MTG1-203ENST00000460848 2730 ntTSL 215.37■□□□□ 0.052e-9■□□□□ 9.7
BCCIPQ9P287 AC064801.2-201ENST00000625052 1303 ntBASIC14.74□□□□□ -0.053e-7■□□□□ 9.6
BCCIPQ9P287 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.865e-9■□□□□ 9.5
BCCIPQ9P287 EGLN3-208ENST00000551935 575 ntTSL 415.56■□□□□ 0.085e-9■□□□□ 9.5
BCCIPQ9P287 FNDC3B-208ENST00000476794 682 ntTSL 35.88□□□□□ -1.473e-9■□□□□ 9.4
BCCIPQ9P287 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.88■■□□□ 1.576e-8■□□□□ 9.3
BCCIPQ9P287 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.476e-8■□□□□ 9.3
BCCIPQ9P287 C22orf39-204ENST00000509549 2979 ntTSL 215.86■□□□□ 0.136e-8■□□□□ 9.3
BCCIPQ9P287 HIRA-203ENST00000452818 453 ntTSL 511.82□□□□□ -0.526e-8■□□□□ 9.3
BCCIPQ9P287 HIRA-204ENST00000464189 560 ntTSL 411.82□□□□□ -0.526e-8■□□□□ 9.3
BCCIPQ9P287 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.266e-7■□□□□ 9.3
BCCIPQ9P287 SPTBN1-203ENST00000389980 2164 ntTSL 1 (best)12.47□□□□□ -0.416e-7■□□□□ 9.3
BCCIPQ9P287 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC12.44□□□□□ -0.426e-7■□□□□ 9.3
BCCIPQ9P287 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC10.23□□□□□ -0.776e-7■□□□□ 9.3
BCCIPQ9P287 RNF149-202ENST00000424632 2010 ntTSL 221.53■■□□□ 1.048e-30■□□□□ 9.2
BCCIPQ9P287 SNORD89-201ENST00000390981 114 ntBASIC0.84□□□□□ -2.278e-30■□□□□ 9.2
BCCIPQ9P287 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.03■□□□□ -03e-53■□□□□ 9.2
BCCIPQ9P287 SCML1-205ENST00000419185 817 ntTSL 315.21■□□□□ 0.039e-9■□□□□ 9.2
BCCIPQ9P287 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.239e-9■□□□□ 9.2
BCCIPQ9P287 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.239e-9■□□□□ 9.2
BCCIPQ9P287 SCML1-202ENST00000380043 2830 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.619e-9■□□□□ 9.2
BCCIPQ9P287 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.059e-9■□□□□ 9.2
BCCIPQ9P287 SCML1-206ENST00000427362 846 ntTSL 58.45□□□□□ -1.069e-9■□□□□ 9.2
BCCIPQ9P287 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.438e-7■□□□□ 9.1
BCCIPQ9P287 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC10.19□□□□□ -0.788e-7■□□□□ 9.1
BCCIPQ9P287 SETD5-208ENST00000421188 1323 ntTSL 59.56□□□□□ -0.888e-7■□□□□ 9.1
BCCIPQ9P287 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC9.48□□□□□ -0.898e-7■□□□□ 9.1
BCCIPQ9P287 SETD5-206ENST00000413704 3428 ntTSL 28.99□□□□□ -0.978e-7■□□□□ 9.1
BCCIPQ9P287 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.988e-7■□□□□ 9.1
BCCIPQ9P287 SETD5-202ENST00000399686 3362 ntTSL 58.64□□□□□ -1.038e-7■□□□□ 9.1
BCCIPQ9P287 SETD5-228ENST00000493918 4861 ntTSL 1 (best)7.78□□□□□ -1.168e-7■□□□□ 9.1
BCCIPQ9P287 SETD5-217ENST00000466242 4038 ntTSL 27.48□□□□□ -1.218e-7■□□□□ 9.1
BCCIPQ9P287 F7-203ENST00000444337 564 ntTSL 520.76■□□□□ 0.911e-6■□□□□ 9.1
BCCIPQ9P287 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.421e-6■□□□□ 9.1
BCCIPQ9P287 F7-206ENST00000541084 2873 ntTSL 2 BASIC12.81□□□□□ -0.361e-6■□□□□ 9.1
Retrieved 100 of 1,347 protein–RNA pairs in 227.7 ms