RNA–Protein interactions for RNA: ENST00000545875.4

GOLGA3-207, Transcript of golgin A3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GOLGA3, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA3-207ENST00000545875 NISCHQ9Y2I1 1504 aa22.85■■□□□ 1.25
GOLGA3-207ENST00000545875 DCAF8L2P0C7V8 631 aa19.95■□□□□ 0.78
GOLGA3-207ENST00000545875 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
GOLGA3-207ENST00000545875 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.72
GOLGA3-207ENST00000545875 CCDC180Q9P1Z9 1646 aa19.3■□□□□ 0.68
GOLGA3-207ENST00000545875 ZCCHC6Q5VYS8 1495 aaKnown RBP19.19■□□□□ 0.66
GOLGA3-207ENST00000545875 ABCC9O60706 1549 aa18.67■□□□□ 0.58
GOLGA3-207ENST00000545875 DCAF1Q9Y4B6 1507 aa18.52■□□□□ 0.56
GOLGA3-207ENST00000545875 CHIC1Q5VXU3 224 aa18.52■□□□□ 0.56
GOLGA3-207ENST00000545875 SCRIBQ14160 1630 aa18.42■□□□□ 0.54
GOLGA3-207ENST00000545875 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
GOLGA3-207ENST00000545875 FAM9AQ8IZU1 332 aaPredicted RBP18.14■□□□□ 0.49
GOLGA3-207ENST00000545875 LOC105371045A0A1W2PR82 267 aa18.13■□□□□ 0.49
GOLGA3-207ENST00000545875 MYO15BQ96JP2 1530 aa18.12■□□□□ 0.49
GOLGA3-207ENST00000545875 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
GOLGA3-207ENST00000545875 NACADO15069 1562 aa18.09■□□□□ 0.49
GOLGA3-207ENST00000545875 RSF1Q96T23 1441 aaPredicted RBP18.08■□□□□ 0.48
GOLGA3-207ENST00000545875 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
GOLGA3-207ENST00000545875 PCGF6Q9BYE7 350 aa17.97■□□□□ 0.47
GOLGA3-207ENST00000545875 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.47
GOLGA3-207ENST00000545875 RB1CC1Q8TDY2 1594 aa17.93■□□□□ 0.46
GOLGA3-207ENST00000545875 MROH2BQ7Z745 1585 aa17.8■□□□□ 0.44
GOLGA3-207ENST00000545875 HRCP23327 699 aa17.74■□□□□ 0.43
GOLGA3-207ENST00000545875 WIZO95785 1651 aa17.66■□□□□ 0.42
GOLGA3-207ENST00000545875 BAZ1AQ9NRL2 1556 aaPredicted RBP17.61■□□□□ 0.41
GOLGA3-207ENST00000545875 PPARGC1BQ86YN6 1023 aaKnown RBP17.56■□□□□ 0.4
GOLGA3-207ENST00000545875 TRIM26Q12899 539 aaPredicted RBP17.52■□□□□ 0.39
GOLGA3-207ENST00000545875 TTBK1Q5TCY1 1321 aaPredicted RBP17.48■□□□□ 0.39
GOLGA3-207ENST00000545875 UBTFP17480 764 aaKnown RBP17.42■□□□□ 0.38
GOLGA3-207ENST00000545875 SMARCA4P51532 1647 aa17.41■□□□□ 0.38
GOLGA3-207ENST00000545875 CCDC88BA6NC98 1476 aa17.39■□□□□ 0.37
GOLGA3-207ENST00000545875 TOP2AP11388 1531 aaKnown RBP17.34■□□□□ 0.37
GOLGA3-207ENST00000545875 RANGAP1P46060 587 aaPredicted RBP17.34■□□□□ 0.37
GOLGA3-207ENST00000545875 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.36
GOLGA3-207ENST00000545875 PELP1Q8IZL8 1130 aaKnown RBP17.31■□□□□ 0.36
GOLGA3-207ENST00000545875 ABCC8Q09428 1581 aa17.3■□□□□ 0.36
GOLGA3-207ENST00000545875 BICRAQ9NZM4 1560 aa17.25■□□□□ 0.35
GOLGA3-207ENST00000545875 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
GOLGA3-207ENST00000545875 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
GOLGA3-207ENST00000545875 BAZ1BQ9UIG0 1483 aaKnown RBP17.2■□□□□ 0.34
GOLGA3-207ENST00000545875 SOGA1O94964 1423 aa17.16■□□□□ 0.34
GOLGA3-207ENST00000545875 ATAD2BQ9ULI0 1458 aa17.14■□□□□ 0.33
GOLGA3-207ENST00000545875 ZEB1P37275 1124 aaPredicted RBP17.13■□□□□ 0.33
GOLGA3-207ENST00000545875 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.334e-7■■■□□ 16.7
GOLGA3-207ENST00000545875 APLP2Q06481 763 aa17.08■□□□□ 0.32
GOLGA3-207ENST00000545875 CCER1Q8TC90 406 aaPredicted RBP17.06■□□□□ 0.32
GOLGA3-207ENST00000545875 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
GOLGA3-207ENST00000545875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.31
GOLGA3-207ENST00000545875 CEP162Q5TB80 1403 aa16.99■□□□□ 0.31
GOLGA3-207ENST00000545875 EIF4G1Q04637 1599 aaKnown RBP16.97■□□□□ 0.31
GOLGA3-207ENST00000545875 EEA1Q15075 1411 aa16.96■□□□□ 0.3
GOLGA3-207ENST00000545875 TNIKQ9UKE5 1360 aa16.93■□□□□ 0.3
GOLGA3-207ENST00000545875 GOLGA3Q08378 1498 aa16.9■□□□□ 0.3
GOLGA3-207ENST00000545875 PEG3Q9GZU2 1588 aa16.88■□□□□ 0.29
GOLGA3-207ENST00000545875 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
GOLGA3-207ENST00000545875 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
GOLGA3-207ENST00000545875 CEP164Q9UPV0 1460 aa16.81■□□□□ 0.28
GOLGA3-207ENST00000545875 CLIP1P30622 1438 aa16.8■□□□□ 0.28
GOLGA3-207ENST00000545875 NCAPD3P42695 1498 aa16.79■□□□□ 0.28
GOLGA3-207ENST00000545875 ATP1B4Q9UN42 357 aaPredicted RBP16.77■□□□□ 0.27
GOLGA3-207ENST00000545875 RAPGEF2Q9Y4G8 1499 aa16.72■□□□□ 0.27
GOLGA3-207ENST00000545875 MYT1Q01538 1121 aa16.71■□□□□ 0.27
GOLGA3-207ENST00000545875 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
GOLGA3-207ENST00000545875 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
GOLGA3-207ENST00000545875 HMGXB3Q12766 1538 aa16.65■□□□□ 0.26
GOLGA3-207ENST00000545875 ITGAEP38570 1179 aa16.65■□□□□ 0.26
GOLGA3-207ENST00000545875 P3H3Q8IVL6 736 aa16.63■□□□□ 0.25
GOLGA3-207ENST00000545875 CADPSQ9ULU8 1353 aa16.63■□□□□ 0.25
GOLGA3-207ENST00000545875 CFTRP13569 1480 aa16.6■□□□□ 0.25
GOLGA3-207ENST00000545875 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
GOLGA3-207ENST00000545875 CUX2O14529 1486 aa16.58■□□□□ 0.25
GOLGA3-207ENST00000545875 VPS8Q8N3P4 1428 aa16.57■□□□□ 0.24
GOLGA3-207ENST00000545875 CUX1P39880 1505 aa16.56■□□□□ 0.24
GOLGA3-207ENST00000545875 KIF21BO75037 1637 aa16.54■□□□□ 0.24
GOLGA3-207ENST00000545875 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
GOLGA3-207ENST00000545875 KANK4Q5T7N3 995 aaPredicted RBP16.48■□□□□ 0.23
GOLGA3-207ENST00000545875 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
GOLGA3-207ENST00000545875 DIEXFQ68CQ4 756 aaKnown RBP16.47■□□□□ 0.23
GOLGA3-207ENST00000545875 FANCD2Q9BXW9 1451 aa16.45■□□□□ 0.22
GOLGA3-207ENST00000545875 PRXQ9BXM0 1461 aa16.44■□□□□ 0.22
GOLGA3-207ENST00000545875 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
GOLGA3-207ENST00000545875 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
GOLGA3-207ENST00000545875 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
GOLGA3-207ENST00000545875 NESP48681 1621 aa16.43■□□□□ 0.22
GOLGA3-207ENST00000545875 IGF1RP08069 1367 aa16.42■□□□□ 0.22
GOLGA3-207ENST00000545875 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
GOLGA3-207ENST00000545875 GTF3C3Q9Y5Q9 886 aa16.42■□□□□ 0.22
GOLGA3-207ENST00000545875 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
GOLGA3-207ENST00000545875 CENPBP07199 599 aaPredicted RBP16.37■□□□□ 0.21
GOLGA3-207ENST00000545875 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
GOLGA3-207ENST00000545875 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
GOLGA3-207ENST00000545875 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
GOLGA3-207ENST00000545875 ARAP1Q96P48 1450 aa16.33■□□□□ 0.21
GOLGA3-207ENST00000545875 ZNF316A6NFI3 1004 aaPredicted RBP16.32■□□□□ 0.2
GOLGA3-207ENST00000545875 ARID3CA6NKF2 412 aa16.28■□□□□ 0.2
GOLGA3-207ENST00000545875 ARHGAP35Q9NRY4 1499 aa16.26■□□□□ 0.19
GOLGA3-207ENST00000545875 ACIN1Q9UKV3 1341 aaKnown RBP16.26■□□□□ 0.19
GOLGA3-207ENST00000545875 PDS5BQ9NTI5 1447 aa16.26■□□□□ 0.19
GOLGA3-207ENST00000545875 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
GOLGA3-207ENST00000545875 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms