RNA–Protein interactions for RNA: ENST00000325437.9

UBE2I-201, Transcript of ubiquitin conjugating enzyme E2 I, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2I, Length 2,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2I-201ENST00000325437 NISCHQ9Y2I1 1504 aa28.21■■■□□ 2.11
UBE2I-201ENST00000325437 HRCP23327 699 aa25.28■■□□□ 1.64
UBE2I-201ENST00000325437 PELP1Q8IZL8 1130 aaKnown RBP25.12■■□□□ 1.61
UBE2I-201ENST00000325437 PPARGC1BQ86YN6 1023 aaKnown RBP24.99■■□□□ 1.59
UBE2I-201ENST00000325437 PCGF6Q9BYE7 350 aa24.71■■□□□ 1.55
UBE2I-201ENST00000325437 SHROOM4Q9ULL8 1493 aa24.46■■□□□ 1.51
UBE2I-201ENST00000325437 SCAF1Q9H7N4 1312 aaKnown RBP24.33■■□□□ 1.49
UBE2I-201ENST00000325437 CCDC180Q9P1Z9 1646 aa24.29■■□□□ 1.48
UBE2I-201ENST00000325437 MYT1Q01538 1121 aa24.25■■□□□ 1.47
UBE2I-201ENST00000325437 SUPT5HO00267 1087 aaKnown RBP24.19■■□□□ 1.46
UBE2I-201ENST00000325437 MYO15BQ96JP2 1530 aa23.99■■□□□ 1.43
UBE2I-201ENST00000325437 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.42
UBE2I-201ENST00000325437 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
UBE2I-201ENST00000325437 ZCCHC6Q5VYS8 1495 aaKnown RBP23.67■■□□□ 1.38
UBE2I-201ENST00000325437 TRIM26Q12899 539 aaPredicted RBP23.56■■□□□ 1.36
UBE2I-201ENST00000325437 ACIN1Q9UKV3 1341 aaKnown RBP23.5■■□□□ 1.35
UBE2I-201ENST00000325437 ABCC9O60706 1549 aa23.5■■□□□ 1.35
UBE2I-201ENST00000325437 NEUROD1Q13562 356 aa23.49■■□□□ 1.35
UBE2I-201ENST00000325437 ZEB1P37275 1124 aaPredicted RBP23.47■■□□□ 1.35
UBE2I-201ENST00000325437 LOC105371045A0A1W2PR82 267 aa23.47■■□□□ 1.35
UBE2I-201ENST00000325437 GTF3C3Q9Y5Q9 886 aa23.47■■□□□ 1.35
UBE2I-201ENST00000325437 DCAF1Q9Y4B6 1507 aa23.42■■□□□ 1.34
UBE2I-201ENST00000325437 CENPBP07199 599 aaPredicted RBP23.15■■□□□ 1.3
UBE2I-201ENST00000325437 DIEXFQ68CQ4 756 aaKnown RBP22.87■■□□□ 1.25
UBE2I-201ENST00000325437 BCL11AQ9H165 835 aa22.87■■□□□ 1.25
UBE2I-201ENST00000325437 SCRIBQ14160 1630 aa22.83■■□□□ 1.25
UBE2I-201ENST00000325437 TTBK1Q5TCY1 1321 aaPredicted RBP22.81■■□□□ 1.24
UBE2I-201ENST00000325437 YTHDC1Q96MU7 727 aaKnown RBP22.79■■□□□ 1.24
UBE2I-201ENST00000325437 FAM9AQ8IZU1 332 aaPredicted RBP22.71■■□□□ 1.23
UBE2I-201ENST00000325437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.71■■□□□ 1.23
UBE2I-201ENST00000325437 NACADO15069 1562 aa22.69■■□□□ 1.22
UBE2I-201ENST00000325437 CCER1Q8TC90 406 aaPredicted RBP22.66■■□□□ 1.22
UBE2I-201ENST00000325437 EHMT2Q96KQ7 1210 aa22.58■■□□□ 1.21
UBE2I-201ENST00000325437 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
UBE2I-201ENST00000325437 ANP32EQ9BTT0 268 aa22.46■■□□□ 1.19
UBE2I-201ENST00000325437 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
UBE2I-201ENST00000325437 CSRNP3Q8WYN3 585 aa22.34■■□□□ 1.17
UBE2I-201ENST00000325437 PRKCSHP14314 528 aaPredicted RBP22.33■■□□□ 1.17
UBE2I-201ENST00000325437 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
UBE2I-201ENST00000325437 UNC13AQ9UPW8 1703 aa22.26■■□□□ 1.15
UBE2I-201ENST00000325437 MIER1Q8N108 512 aa22.25■■□□□ 1.15
UBE2I-201ENST00000325437 ZNF316A6NFI3 1004 aaPredicted RBP22.22■■□□□ 1.15
UBE2I-201ENST00000325437 CECR2Q9BXF3 1484 aa22.18■■□□□ 1.14
UBE2I-201ENST00000325437 TSHZ2Q9NRE2 1034 aa22.16■■□□□ 1.14
UBE2I-201ENST00000325437 SUPT16HQ9Y5B9 1047 aaKnown RBP22.1■■□□□ 1.13
UBE2I-201ENST00000325437 RSF1Q96T23 1441 aaPredicted RBP22.09■■□□□ 1.13
UBE2I-201ENST00000325437 BICRAQ9NZM4 1560 aa22■■□□□ 1.11
UBE2I-201ENST00000325437 MROH2BQ7Z745 1585 aa21.96■■□□□ 1.11
UBE2I-201ENST00000325437 WIZO95785 1651 aa21.82■■□□□ 1.08
UBE2I-201ENST00000325437 BCANQ96GW7 911 aa21.8■■□□□ 1.08
UBE2I-201ENST00000325437 CLSPNQ9HAW4 1339 aa21.75■■□□□ 1.07
UBE2I-201ENST00000325437 BAZ1AQ9NRL2 1556 aaPredicted RBP21.71■■□□□ 1.07
UBE2I-201ENST00000325437 ERICH6Q7L0X2 663 aa21.71■■□□□ 1.07
UBE2I-201ENST00000325437 SMARCA4P51532 1647 aa21.67■■□□□ 1.06
UBE2I-201ENST00000325437 RBM19Q9Y4C8 960 aaKnown RBP21.62■■□□□ 1.05
UBE2I-201ENST00000325437 FKBP8Q14318 412 aa21.51■■□□□ 1.03
UBE2I-201ENST00000325437 ANO8Q9HCE9 1232 aaPredicted RBP21.5■■□□□ 1.03
UBE2I-201ENST00000325437 HNRNPUL2Q1KMD3 747 aaKnown RBP21.49■■□□□ 1.03
UBE2I-201ENST00000325437 MSH5O43196 834 aa21.47■■□□□ 1.03
UBE2I-201ENST00000325437 ITGAEP38570 1179 aa21.44■■□□□ 1.02
UBE2I-201ENST00000325437 APLP2Q06481 763 aa21.36■■□□□ 1.01
UBE2I-201ENST00000325437 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
UBE2I-201ENST00000325437 KCNH8Q96L42 1107 aa21.34■■□□□ 1.01
UBE2I-201ENST00000325437 EIF4G1Q04637 1599 aaKnown RBP21.34■■□□□ 1.01
UBE2I-201ENST00000325437 ATAD2BQ9ULI0 1458 aa21.34■■□□□ 1.01
UBE2I-201ENST00000325437 ABCC8Q09428 1581 aa21.33■■□□□ 1.01
UBE2I-201ENST00000325437 CCDC88BA6NC98 1476 aa21.32■■□□□ 1
UBE2I-201ENST00000325437 DEKP35659 375 aaKnown RBP21.29■■□□□ 1
UBE2I-201ENST00000325437 NEFLP07196 543 aa21.26■□□□□ 0.99
UBE2I-201ENST00000325437 SMARCA2P51531 1590 aa21.26■□□□□ 0.99
UBE2I-201ENST00000325437 BAZ1BQ9UIG0 1483 aaKnown RBP21.25■□□□□ 0.99
UBE2I-201ENST00000325437 CEP162Q5TB80 1403 aa21.25■□□□□ 0.99
UBE2I-201ENST00000325437 SOGA1O94964 1423 aa21.23■□□□□ 0.99
UBE2I-201ENST00000325437 UBTFP17480 764 aaKnown RBP21.23■□□□□ 0.99
UBE2I-201ENST00000325437 SALL2Q9Y467 1007 aaPredicted RBP21.2■□□□□ 0.98
UBE2I-201ENST00000325437 CCDC136Q96JN2 1154 aa21.19■□□□□ 0.98
UBE2I-201ENST00000325437 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
UBE2I-201ENST00000325437 RUSC2Q8N2Y8 1516 aa21.16■□□□□ 0.98
UBE2I-201ENST00000325437 WRNQ14191 1432 aaPredicted RBP eCLIP21.15■□□□□ 0.98
UBE2I-201ENST00000325437 FANCIQ9NVI1 1328 aa21.07■□□□□ 0.96
UBE2I-201ENST00000325437 CC2D2AQ9P2K1 1620 aa21.06■□□□□ 0.96
UBE2I-201ENST00000325437 TNIKQ9UKE5 1360 aa21.05■□□□□ 0.96
UBE2I-201ENST00000325437 NBR1Q14596 966 aa21.05■□□□□ 0.96
UBE2I-201ENST00000325437 MYT1LQ9UL68 1186 aa21.05■□□□□ 0.96
UBE2I-201ENST00000325437 TRIM52Q96A61 297 aa21.03■□□□□ 0.96
UBE2I-201ENST00000325437 RANGAP1P46060 587 aaPredicted RBP21.02■□□□□ 0.96
UBE2I-201ENST00000325437 NCAPD3P42695 1498 aa21.02■□□□□ 0.95
UBE2I-201ENST00000325437 CDK11AQ9UQ88 783 aaPredicted RBP21■□□□□ 0.95
UBE2I-201ENST00000325437 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
UBE2I-201ENST00000325437 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.99■□□□□ 0.95
UBE2I-201ENST00000325437 RTN4Q9NQC3 1192 aaKnown RBP20.99■□□□□ 0.95
UBE2I-201ENST00000325437 IRX6P78412 446 aaPredicted RBP20.94■□□□□ 0.94
UBE2I-201ENST00000325437 HMGXB3Q12766 1538 aa20.92■□□□□ 0.94
UBE2I-201ENST00000325437 DDX10Q13206 875 aaKnown RBP20.87■□□□□ 0.93
UBE2I-201ENST00000325437 IL27Q8NEV9 243 aa20.87■□□□□ 0.93
UBE2I-201ENST00000325437 GOLGA3Q08378 1498 aa20.85■□□□□ 0.93
UBE2I-201ENST00000325437 ERICH6BQ5W0A0 696 aa20.84■□□□□ 0.93
UBE2I-201ENST00000325437 UBE2Q2Q8WVN8 375 aa20.82■□□□□ 0.92
UBE2I-201ENST00000325437 DHX57Q6P158 1386 aaKnown RBP20.79■□□□□ 0.92
UBE2I-201ENST00000325437 EEA1Q15075 1411 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms