RNA–Protein interactions for RNA: ENST00000456883.6

GOLGA3-203, Transcript of golgin A3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GOLGA3, Length 5,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA3-203ENST00000456883 DCAF8L2P0C7V8 631 aa32.47■■■□□ 2.79
GOLGA3-203ENST00000456883 SUPT5HO00267 1087 aaKnown RBP31.4■■■□□ 2.62
GOLGA3-203ENST00000456883 NISCHQ9Y2I1 1504 aa31.16■■■□□ 2.58
GOLGA3-203ENST00000456883 SHROOM4Q9ULL8 1493 aa30.82■■■□□ 2.52
GOLGA3-203ENST00000456883 EHMT2Q96KQ7 1210 aa30.45■■■□□ 2.46
GOLGA3-203ENST00000456883 PCGF6Q9BYE7 350 aa29.77■■■□□ 2.36
GOLGA3-203ENST00000456883 FAM9AQ8IZU1 332 aaPredicted RBP29.63■■■□□ 2.33
GOLGA3-203ENST00000456883 PELP1Q8IZL8 1130 aaKnown RBP29.58■■■□□ 2.33
GOLGA3-203ENST00000456883 TTBK1Q5TCY1 1321 aaPredicted RBP29.47■■■□□ 2.31
GOLGA3-203ENST00000456883 APLP2Q06481 763 aa29.4■■■□□ 2.3
GOLGA3-203ENST00000456883 ZEB1P37275 1124 aaPredicted RBP28.94■■■□□ 2.22
GOLGA3-203ENST00000456883 CENPBP07199 599 aaPredicted RBP28.94■■■□□ 2.22
GOLGA3-203ENST00000456883 CCER1Q8TC90 406 aaPredicted RBP28.93■■■□□ 2.22
GOLGA3-203ENST00000456883 TRIM41Q8WV44 630 aa28.93■■■□□ 2.22
GOLGA3-203ENST00000456883 RANGAP1P46060 587 aaPredicted RBP28.9■■■□□ 2.22
GOLGA3-203ENST00000456883 YTHDC1Q96MU7 727 aaKnown RBP28.56■■■□□ 2.16
GOLGA3-203ENST00000456883 PPARGC1BQ86YN6 1023 aaKnown RBP28.55■■■□□ 2.16
GOLGA3-203ENST00000456883 ERICH6Q7L0X2 663 aa28.5■■■□□ 2.15
GOLGA3-203ENST00000456883 UBTFP17480 764 aaKnown RBP28.5■■■□□ 2.15
GOLGA3-203ENST00000456883 ATP1B4Q9UN42 357 aaPredicted RBP28.41■■■□□ 2.14
GOLGA3-203ENST00000456883 HRCP23327 699 aa28.37■■■□□ 2.13
GOLGA3-203ENST00000456883 TRIM26Q12899 539 aaPredicted RBP28.32■■■□□ 2.12
GOLGA3-203ENST00000456883 LOC105371045A0A1W2PR82 267 aa28.18■■■□□ 2.1
GOLGA3-203ENST00000456883 NEFLP07196 543 aa28.13■■■□□ 2.09
GOLGA3-203ENST00000456883 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
GOLGA3-203ENST00000456883 MYT1Q01538 1121 aa27.95■■■□□ 2.07
GOLGA3-203ENST00000456883 ITGAEP38570 1179 aa27.76■■■□□ 2.03
GOLGA3-203ENST00000456883 HNRNPUL2Q1KMD3 747 aaKnown RBP27.71■■■□□ 2.03
GOLGA3-203ENST00000456883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.61■■■□□ 2.01
GOLGA3-203ENST00000456883 DIEXFQ68CQ4 756 aaKnown RBP27.46■■□□□ 1.99
GOLGA3-203ENST00000456883 POLR3GLQ9BT43 218 aa27.44■■□□□ 1.98
GOLGA3-203ENST00000456883 CNGB1Q14028 1251 aaPredicted RBP27.37■■□□□ 1.97
GOLGA3-203ENST00000456883 DAXXQ9UER7 740 aaPredicted RBP27.18■■□□□ 1.94
GOLGA3-203ENST00000456883 GTF3C3Q9Y5Q9 886 aa27.11■■□□□ 1.93
GOLGA3-203ENST00000456883 MYT1LQ9UL68 1186 aa27.09■■□□□ 1.93
GOLGA3-203ENST00000456883 BCANQ96GW7 911 aa26.96■■□□□ 1.91
GOLGA3-203ENST00000456883 FAM50AQ14320 339 aaKnown RBP26.94■■□□□ 1.9
GOLGA3-203ENST00000456883 NEUROD1Q13562 356 aa26.89■■□□□ 1.9
GOLGA3-203ENST00000456883 RTL5Q5HYW3 569 aaPredicted RBP26.77■■□□□ 1.88
GOLGA3-203ENST00000456883 ZNF316A6NFI3 1004 aaPredicted RBP26.75■■□□□ 1.87
GOLGA3-203ENST00000456883 TRIM52Q96A61 297 aa26.72■■□□□ 1.87
GOLGA3-203ENST00000456883 ACIN1Q9UKV3 1341 aaKnown RBP26.7■■□□□ 1.86
GOLGA3-203ENST00000456883 SLC4A1APQ9BWU0 796 aaKnown RBP26.67■■□□□ 1.86
GOLGA3-203ENST00000456883 PABPN1Q86U42 306 aaKnown RBP eCLIP26.66■■□□□ 1.86
GOLGA3-203ENST00000456883 CLSPNQ9HAW4 1339 aa26.65■■□□□ 1.86
GOLGA3-203ENST00000456883 ABCC9O60706 1549 aa26.63■■□□□ 1.85
GOLGA3-203ENST00000456883 ANP32CO43423 234 aa26.61■■□□□ 1.85
GOLGA3-203ENST00000456883 ZNF326Q5BKZ1 582 aaKnown RBP26.5■■□□□ 1.83
GOLGA3-203ENST00000456883 CDK11AQ9UQ88 783 aaPredicted RBP26.49■■□□□ 1.83
GOLGA3-203ENST00000456883 CSRNP3Q8WYN3 585 aa26.36■■□□□ 1.81
GOLGA3-203ENST00000456883 P3H3Q8IVL6 736 aa26.3■■□□□ 1.8
GOLGA3-203ENST00000456883 DCAF1Q9Y4B6 1507 aa26.2■■□□□ 1.78
GOLGA3-203ENST00000456883 ARID3CA6NKF2 412 aa26.17■■□□□ 1.78
GOLGA3-203ENST00000456883 FKBP8Q14318 412 aa26.15■■□□□ 1.78
GOLGA3-203ENST00000456883 SCAF1Q9H7N4 1312 aaKnown RBP26.06■■□□□ 1.76
GOLGA3-203ENST00000456883 FBLN2P98095 1184 aa26.03■■□□□ 1.76
GOLGA3-203ENST00000456883 NPM2Q86SE8 214 aaKnown RBP26.02■■□□□ 1.76
GOLGA3-203ENST00000456883 DDX10Q13206 875 aaKnown RBP26.01■■□□□ 1.75
GOLGA3-203ENST00000456883 ANP32AP39687 249 aaKnown RBP26.01■■□□□ 1.75
GOLGA3-203ENST00000456883 BCL11AQ9H165 835 aa26.01■■□□□ 1.75
GOLGA3-203ENST00000456883 CANXP27824 592 aaKnown RBP25.99■■□□□ 1.75
GOLGA3-203ENST00000456883 HNRNPUQ00839 825 aaKnown RBP eCLIP25.94■■□□□ 1.74
GOLGA3-203ENST00000456883 ZNF777Q9ULD5 760 aaPredicted RBP25.91■■□□□ 1.74
GOLGA3-203ENST00000456883 MIER1Q8N108 512 aa25.88■■□□□ 1.73
GOLGA3-203ENST00000456883 ZBTB47Q9UFB7 747 aaPredicted RBP25.88■■□□□ 1.73
GOLGA3-203ENST00000456883 TONSLQ96HA7 1378 aa25.87■■□□□ 1.73
GOLGA3-203ENST00000456883 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
GOLGA3-203ENST00000456883 FAM9BQ8IZU0 186 aa25.86■■□□□ 1.73
GOLGA3-203ENST00000456883 SCRIBQ14160 1630 aa25.84■■□□□ 1.73
GOLGA3-203ENST00000456883 ZCCHC6Q5VYS8 1495 aaKnown RBP25.83■■□□□ 1.73
GOLGA3-203ENST00000456883 SALL2Q9Y467 1007 aaPredicted RBP25.73■■□□□ 1.71
GOLGA3-203ENST00000456883 SLC24A1O60721 1099 aa25.7■■□□□ 1.71
GOLGA3-203ENST00000456883 HIRIP3Q9BW71 556 aaPredicted RBP25.7■■□□□ 1.7
GOLGA3-203ENST00000456883 CHIC2Q9UKJ5 165 aa25.66■■□□□ 1.7
GOLGA3-203ENST00000456883 IRX6P78412 446 aaPredicted RBP25.66■■□□□ 1.7
GOLGA3-203ENST00000456883 NEFMP07197 916 aa25.63■■□□□ 1.69
GOLGA3-203ENST00000456883 NBR1Q14596 966 aa25.63■■□□□ 1.69
GOLGA3-203ENST00000456883 EIF5BO60841 1220 aaKnown RBP25.61■■□□□ 1.69
GOLGA3-203ENST00000456883 CCDC136Q96JN2 1154 aa25.59■■□□□ 1.69
GOLGA3-203ENST00000456883 MRS2Q9HD23 443 aa25.54■■□□□ 1.68
GOLGA3-203ENST00000456883 TMC1Q8TDI8 760 aa25.53■■□□□ 1.68
GOLGA3-203ENST00000456883 CLIP1P30622 1438 aa25.47■■□□□ 1.67
GOLGA3-203ENST00000456883 CHGAP10645 457 aaKnown RBP25.42■■□□□ 1.66
GOLGA3-203ENST00000456883 HSP90AA1P07900 732 aaKnown RBP25.41■■□□□ 1.66
GOLGA3-203ENST00000456883 KDM2AQ9Y2K7 1162 aa25.4■■□□□ 1.66
GOLGA3-203ENST00000456883 UPF2Q9HAU5 1272 aaKnown RBP25.39■■□□□ 1.65
GOLGA3-203ENST00000456883 CCDC180Q9P1Z9 1646 aa25.38■■□□□ 1.65
GOLGA3-203ENST00000456883 CEP162Q5TB80 1403 aa25.37■■□□□ 1.65
GOLGA3-203ENST00000456883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.36■■□□□ 1.656e-7■■■■□ 19.7
GOLGA3-203ENST00000456883 ARXQ96QS3 562 aa25.33■■□□□ 1.65
GOLGA3-203ENST00000456883 MTUS2Q5JR59 1369 aa25.32■■□□□ 1.64
GOLGA3-203ENST00000456883 ANP32BQ92688 251 aaKnown RBP25.31■■□□□ 1.64
GOLGA3-203ENST00000456883 SENP3-EIF4A1A0A087X0R7 540 aa25.3■■□□□ 1.64
GOLGA3-203ENST00000456883 RRP7BPQ9NSQ0 103 aa25.29■■□□□ 1.64
GOLGA3-203ENST00000456883 EIF4G2P78344 907 aaKnown RBP eCLIP25.28■■□□□ 1.647e-8■■■■■ 63.9
GOLGA3-203ENST00000456883 WDR43Q15061 677 aaKnown RBP eCLIP25.27■■□□□ 1.646e-7■□□□□ 9.1
GOLGA3-203ENST00000456883 RSF1Q96T23 1441 aaPredicted RBP25.26■■□□□ 1.63
GOLGA3-203ENST00000456883 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.25■■□□□ 1.63
GOLGA3-203ENST00000456883 ESF1Q9H501 851 aaKnown RBP25.22■■□□□ 1.63
GOLGA3-203ENST00000456883 GOLGA3Q08378 1498 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms