RNA–Protein interactions for RNA: ENST00000351986.10

NPM1-202, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-202ENST00000351986 AEBP2Q6ZN18 517 aaPredicted RBP30.81■■■□□ 2.52
NPM1-202ENST00000351986 CHIC1Q5VXU3 224 aa28.94■■■□□ 2.22
NPM1-202ENST00000351986 SENP3Q9H4L4 574 aaPredicted RBP26.13■■□□□ 1.77
NPM1-202ENST00000351986 PHF23Q9BUL5 403 aaPredicted RBP25.87■■□□□ 1.73
NPM1-202ENST00000351986 FOXD1Q16676 465 aa24.51■■□□□ 1.51
NPM1-202ENST00000351986 PLPPR3Q6T4P5 718 aa22.98■■□□□ 1.27
NPM1-202ENST00000351986 MSH5O43196 834 aa22.86■■□□□ 1.25
NPM1-202ENST00000351986 PPP6R1Q9UPN7 881 aa22.84■■□□□ 1.25
NPM1-202ENST00000351986 PIAS4Q8N2W9 510 aaPredicted RBP22.82■■□□□ 1.24
NPM1-202ENST00000351986 POTEDQ86YR6 584 aa22.81■■□□□ 1.24
NPM1-202ENST00000351986 ADRA2BP18089 450 aa22.74■■□□□ 1.23
NPM1-202ENST00000351986 MAPK8IP2Q13387 824 aaPredicted RBP20.99■□□□□ 0.95
NPM1-202ENST00000351986 DMRT2Q9Y5R5 561 aa20.73■□□□□ 0.91
NPM1-202ENST00000351986 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.89
NPM1-202ENST00000351986 PPP4R3CPQ6ZMV5 832 aa20.19■□□□□ 0.82
NPM1-202ENST00000351986 DCAF8L1A6NGE4 600 aa19.99■□□□□ 0.79
NPM1-202ENST00000351986 HOXD11P31277 338 aaPredicted RBP19.87■□□□□ 0.77
NPM1-202ENST00000351986 CACNB1Q02641 598 aaPredicted RBP19.85■□□□□ 0.77
NPM1-202ENST00000351986 CNKSR2Q8WXI2 1034 aa19.79■□□□□ 0.76
NPM1-202ENST00000351986 RNF216Q9NWF9 866 aaPredicted RBP19.65■□□□□ 0.74
NPM1-202ENST00000351986 RNF39Q9H2S5 420 aa19.56■□□□□ 0.72
NPM1-202ENST00000351986 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
NPM1-202ENST00000351986 C1QBPQ07021 282 aaKnown RBP19.19■□□□□ 0.66
NPM1-202ENST00000351986 NPM3O75607 178 aaKnown RBP19.09■□□□□ 0.65
NPM1-202ENST00000351986 DNAJC5BQ9UF47 199 aa19.07■□□□□ 0.64
NPM1-202ENST00000351986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.634e-10■■□□□ 12.1
NPM1-202ENST00000351986 KCNA4P22459 653 aa18.59■□□□□ 0.57
NPM1-202ENST00000351986 U3KPZ7 1027 aaPredicted RBP18.58■□□□□ 0.56
NPM1-202ENST00000351986 SPINK5Q9NQ38 1064 aaPredicted RBP18.44■□□□□ 0.54
NPM1-202ENST00000351986 CAPN15O75808 1086 aa18.35■□□□□ 0.53
NPM1-202ENST00000351986 SLC4A2P04920 1241 aa18.31■□□□□ 0.52
NPM1-202ENST00000351986 DSG3P32926 999 aa18.28■□□□□ 0.52
NPM1-202ENST00000351986 TRHP20396 242 aaPredicted RBP18.04■□□□□ 0.48
NPM1-202ENST00000351986 ABCB7O75027 752 aa17.99■□□□□ 0.47
NPM1-202ENST00000351986 ZNF219Q9P2Y4 722 aaPredicted RBP17.86■□□□□ 0.45
NPM1-202ENST00000351986 APLP2Q06481 763 aa17.83■□□□□ 0.44
NPM1-202ENST00000351986 POTEHQ6S545 545 aa17.81■□□□□ 0.44
NPM1-202ENST00000351986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
NPM1-202ENST00000351986 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
NPM1-202ENST00000351986 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
NPM1-202ENST00000351986 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
NPM1-202ENST00000351986 POLA2Q14181 598 aa17.49■□□□□ 0.39
NPM1-202ENST00000351986 SLC4A1APQ9BWU0 796 aaKnown RBP17.44■□□□□ 0.38
NPM1-202ENST00000351986 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
NPM1-202ENST00000351986 RBM42Q9BTD8 480 aaKnown RBP17.31■□□□□ 0.36
NPM1-202ENST00000351986 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
NPM1-202ENST00000351986 ZBTB22O15209 634 aa17.13■□□□□ 0.33
NPM1-202ENST00000351986 CHRDL2Q6WN34 429 aa17.13■□□□□ 0.33
NPM1-202ENST00000351986 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
NPM1-202ENST00000351986 ZBTB12Q9Y330 459 aaPredicted RBP16.94■□□□□ 0.3
NPM1-202ENST00000351986 AKT1S1Q96B36 256 aa16.92■□□□□ 0.3
NPM1-202ENST00000351986 REM2Q8IYK8 340 aaPredicted RBP16.85■□□□□ 0.29
NPM1-202ENST00000351986 PIP4P2Q8N4L2 257 aa16.72■□□□□ 0.27
NPM1-202ENST00000351986 ATXN8OSP0DMR3 200 aa16.7■□□□□ 0.26
NPM1-202ENST00000351986 PITPNM1O00562 1244 aa16.69■□□□□ 0.26
NPM1-202ENST00000351986 SP7Q8TDD2 431 aaPredicted RBP16.58■□□□□ 0.24
NPM1-202ENST00000351986 FXR2P51116 673 aaKnown RBP eCLIP16.54■□□□□ 0.24
NPM1-202ENST00000351986 FBLN2P98095 1184 aa16.51■□□□□ 0.23
NPM1-202ENST00000351986 MKRN4PQ13434 485 aaPredicted RBP16.5■□□□□ 0.23
NPM1-202ENST00000351986 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
NPM1-202ENST00000351986 HAX1O00165 279 aa16.47■□□□□ 0.23
NPM1-202ENST00000351986 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
NPM1-202ENST00000351986 SPDYE2Q495Y8 402 aa16.47■□□□□ 0.23
NPM1-202ENST00000351986 EVX2Q03828 476 aa16.35■□□□□ 0.21
NPM1-202ENST00000351986 CLEC11AQ9Y240 323 aa16.34■□□□□ 0.21
NPM1-202ENST00000351986 ZNF692Q9BU19 519 aaPredicted RBP16.31■□□□□ 0.2
NPM1-202ENST00000351986 SSUH2Q9Y2M2 353 aa16.26■□□□□ 0.19
NPM1-202ENST00000351986 PRKAR2AP13861 404 aaKnown RBP16.25■□□□□ 0.19
NPM1-202ENST00000351986 SPDYE1Q8NFV5 336 aaPredicted RBP16.24■□□□□ 0.19
NPM1-202ENST00000351986 CHADLQ6NUI6 762 aa16.11■□□□□ 0.17
NPM1-202ENST00000351986 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
NPM1-202ENST00000351986 PABPN1Q86U42 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
NPM1-202ENST00000351986 C19orf67A6NJJ6 358 aa16.02■□□□□ 0.16
NPM1-202ENST00000351986 PRR29P0C7W0 189 aa15.98■□□□□ 0.15
NPM1-202ENST00000351986 GABBR2O75899 941 aa15.88■□□□□ 0.13
NPM1-202ENST00000351986 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
NPM1-202ENST00000351986 FARP1Q9Y4F1 1045 aaPredicted RBP15.74■□□□□ 0.11
NPM1-202ENST00000351986 CD44P16070 742 aaKnown RBP15.7■□□□□ 0.1
NPM1-202ENST00000351986 POTEIP0CG38 1075 aa15.59■□□□□ 0.09
NPM1-202ENST00000351986 CREBZFQ9NS37 354 aa15.58■□□□□ 0.08
NPM1-202ENST00000351986 LHX8Q68G74 356 aa15.57■□□□□ 0.08
NPM1-202ENST00000351986 SPDYE4A6NLX3 237 aa15.56■□□□□ 0.08
NPM1-202ENST00000351986 ZRANB1Q9UGI0 708 aa15.47■□□□□ 0.07
NPM1-202ENST00000351986 STAG3Q9UJ98 1225 aa15.46■□□□□ 0.07
NPM1-202ENST00000351986 ZNF579Q8NAF0 562 aaKnown RBP15.4■□□□□ 0.06
NPM1-202ENST00000351986 DCBLD2Q96PD2 775 aa15.36■□□□□ 0.05
NPM1-202ENST00000351986 GALR2O43603 387 aaPredicted RBP15.34■□□□□ 0.05
NPM1-202ENST00000351986 CLCN6P51797 869 aa15.31■□□□□ 0.04
NPM1-202ENST00000351986 PHF12Q96QT6 1004 aa15.29■□□□□ 0.04
NPM1-202ENST00000351986 MNX1P50219 401 aaPredicted RBP15.28■□□□□ 0.04
NPM1-202ENST00000351986 PAK3O75914 559 aaPredicted RBP15.18■□□□□ 0.02
NPM1-202ENST00000351986 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
NPM1-202ENST00000351986 POTEB2H3BUK9 544 aa15.1■□□□□ 0.01
NPM1-202ENST00000351986 PROM2Q8N271 834 aa15.1■□□□□ 0.01
NPM1-202ENST00000351986 PELP1Q8IZL8 1130 aaKnown RBP15.09■□□□□ 0.01
NPM1-202ENST00000351986 MS4A3Q96HJ5 214 aa15.05■□□□□ -0
NPM1-202ENST00000351986 TSPYL2Q9H2G4 693 aaPredicted RBP15.04■□□□□ -0
NPM1-202ENST00000351986 OTUD5Q96G74 571 aa15.03■□□□□ -0
NPM1-202ENST00000351986 ATMINO43313 823 aaPredicted RBP14.92□□□□□ -0.02
NPM1-202ENST00000351986 CCDC61Q9Y6R9 512 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms