RNA–Protein interactions for RNA: ENST00000518442.5

EIF3E-204, Transcript of eukaryotic translation initiation factor 3 subunit E, humanhuman

TSL 1 (best)

Gene EIF3E, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3E-204ENST00000518442 AEBP2Q6ZN18 517 aaPredicted RBP23.55■■□□□ 1.36
EIF3E-204ENST00000518442 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
EIF3E-204ENST00000518442 NISCHQ9Y2I1 1504 aa21.36■■□□□ 1.01
EIF3E-204ENST00000518442 SENP3Q9H4L4 574 aaPredicted RBP20.13■□□□□ 0.81
EIF3E-204ENST00000518442 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
EIF3E-204ENST00000518442 POTEDQ86YR6 584 aa19.22■□□□□ 0.67
EIF3E-204ENST00000518442 CCDC180Q9P1Z9 1646 aa18.87■□□□□ 0.61
EIF3E-204ENST00000518442 FOXD1Q16676 465 aa18.72■□□□□ 0.59
EIF3E-204ENST00000518442 ABCC9O60706 1549 aa18.57■□□□□ 0.56
EIF3E-204ENST00000518442 DCAF8L2P0C7V8 631 aa18.03■□□□□ 0.48
EIF3E-204ENST00000518442 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
EIF3E-204ENST00000518442 ZCCHC6Q5VYS8 1495 aaKnown RBP17.81■□□□□ 0.44
EIF3E-204ENST00000518442 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
EIF3E-204ENST00000518442 NACADO15069 1562 aa17.74■□□□□ 0.43
EIF3E-204ENST00000518442 MYO15BQ96JP2 1530 aa17.57■□□□□ 0.4
EIF3E-204ENST00000518442 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
EIF3E-204ENST00000518442 MSH5O43196 834 aa17.54■□□□□ 0.4
EIF3E-204ENST00000518442 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
EIF3E-204ENST00000518442 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
EIF3E-204ENST00000518442 ADRA2BP18089 450 aa17.5■□□□□ 0.39
EIF3E-204ENST00000518442 PABPN1Q86U42 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
EIF3E-204ENST00000518442 UNC13AQ9UPW8 1703 aa17.41■□□□□ 0.38
EIF3E-204ENST00000518442 SCRIBQ14160 1630 aa17.39■□□□□ 0.38
EIF3E-204ENST00000518442 BICRAQ9NZM4 1560 aa17.26■□□□□ 0.35
EIF3E-204ENST00000518442 SHROOM4Q9ULL8 1493 aa17.16■□□□□ 0.34
EIF3E-204ENST00000518442 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
EIF3E-204ENST00000518442 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
EIF3E-204ENST00000518442 CC2D2AQ9P2K1 1620 aa16.73■□□□□ 0.27
EIF3E-204ENST00000518442 CECR2Q9BXF3 1484 aa16.72■□□□□ 0.27
EIF3E-204ENST00000518442 SMARCA4P51532 1647 aa16.56■□□□□ 0.24
EIF3E-204ENST00000518442 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
EIF3E-204ENST00000518442 MROH2BQ7Z745 1585 aa16.52■□□□□ 0.24
EIF3E-204ENST00000518442 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
EIF3E-204ENST00000518442 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
EIF3E-204ENST00000518442 NCAPD3P42695 1498 aa16.38■□□□□ 0.21
EIF3E-204ENST00000518442 WIZO95785 1651 aa16.37■□□□□ 0.21
EIF3E-204ENST00000518442 RSF1Q96T23 1441 aaPredicted RBP16.35■□□□□ 0.21
EIF3E-204ENST00000518442 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
EIF3E-204ENST00000518442 PEG3Q9GZU2 1588 aa16.31■□□□□ 0.2
EIF3E-204ENST00000518442 HMGXB3Q12766 1538 aa16.29■□□□□ 0.2
EIF3E-204ENST00000518442 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
EIF3E-204ENST00000518442 TOP2AP11388 1531 aaKnown RBP16.13■□□□□ 0.17
EIF3E-204ENST00000518442 NESP48681 1621 aa16.09■□□□□ 0.17
EIF3E-204ENST00000518442 SCAF1Q9H7N4 1312 aaKnown RBP16.09■□□□□ 0.17
EIF3E-204ENST00000518442 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
EIF3E-204ENST00000518442 CCDC88BA6NC98 1476 aa15.98■□□□□ 0.15
EIF3E-204ENST00000518442 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
EIF3E-204ENST00000518442 DMRT2Q9Y5R5 561 aa15.96■□□□□ 0.15
EIF3E-204ENST00000518442 CADPSQ9ULU8 1353 aa15.95■□□□□ 0.14
EIF3E-204ENST00000518442 LAMC3Q9Y6N6 1575 aa15.93■□□□□ 0.14
EIF3E-204ENST00000518442 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
EIF3E-204ENST00000518442 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
EIF3E-204ENST00000518442 PDS5BQ9NTI5 1447 aa15.85■□□□□ 0.13
EIF3E-204ENST00000518442 CFTRP13569 1480 aa15.85■□□□□ 0.13
EIF3E-204ENST00000518442 FANCD2Q9BXW9 1451 aa15.8■□□□□ 0.12
EIF3E-204ENST00000518442 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
EIF3E-204ENST00000518442 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
EIF3E-204ENST00000518442 THOC2Q8NI27 1593 aaKnown RBP15.74■□□□□ 0.11
EIF3E-204ENST00000518442 PRDM2Q13029 1718 aa15.71■□□□□ 0.1
EIF3E-204ENST00000518442 MRC2Q9UBG0 1479 aa15.7■□□□□ 0.1
EIF3E-204ENST00000518442 CUX2O14529 1486 aa15.65■□□□□ 0.1
EIF3E-204ENST00000518442 URB2Q14146 1524 aaKnown RBP15.64■□□□□ 0.09
EIF3E-204ENST00000518442 WDR62O43379 1518 aa15.62■□□□□ 0.09
EIF3E-204ENST00000518442 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
EIF3E-204ENST00000518442 DNMBPQ6XZF7 1577 aa15.51■□□□□ 0.07
EIF3E-204ENST00000518442 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
EIF3E-204ENST00000518442 CUX1P39880 1505 aa15.48■□□□□ 0.07
EIF3E-204ENST00000518442 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
EIF3E-204ENST00000518442 POLA1P09884 1462 aaPredicted RBP15.43■□□□□ 0.06
EIF3E-204ENST00000518442 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
EIF3E-204ENST00000518442 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
EIF3E-204ENST00000518442 WRNQ14191 1432 aaPredicted RBP eCLIP15.42■□□□□ 0.06
EIF3E-204ENST00000518442 ZNF608Q9ULD9 1512 aaPredicted RBP15.4■□□□□ 0.06
EIF3E-204ENST00000518442 HOXD11P31277 338 aaPredicted RBP15.4■□□□□ 0.06
EIF3E-204ENST00000518442 SYNJ1O43426 1573 aa15.39■□□□□ 0.05
EIF3E-204ENST00000518442 IFT140Q96RY7 1462 aa15.39■□□□□ 0.05
EIF3E-204ENST00000518442 SOGA1O94964 1423 aa15.38■□□□□ 0.05
EIF3E-204ENST00000518442 KCNA4P22459 653 aa15.36■□□□□ 0.05
EIF3E-204ENST00000518442 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
EIF3E-204ENST00000518442 TDRD9Q8NDG6 1382 aaKnown RBP15.34■□□□□ 0.05
EIF3E-204ENST00000518442 AQRO60306 1485 aaKnown RBP eCLIP15.33■□□□□ 0.05
EIF3E-204ENST00000518442 TOP2BQ02880 1626 aa15.33■□□□□ 0.04
EIF3E-204ENST00000518442 DCAF8L1A6NGE4 600 aa15.32■□□□□ 0.04
EIF3E-204ENST00000518442 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
EIF3E-204ENST00000518442 BIVM-ERCC5R4GMW8 1640 aa15.31■□□□□ 0.04
EIF3E-204ENST00000518442 EIF4G3O43432 1585 aaKnown RBP15.3■□□□□ 0.04
EIF3E-204ENST00000518442 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
EIF3E-204ENST00000518442 WDR97A6NE52 1622 aa15.23■□□□□ 0.03
EIF3E-204ENST00000518442 ABCA10Q8WWZ4 1543 aa15.22■□□□□ 0.03
EIF3E-204ENST00000518442 FBLN2P98095 1184 aa15.21■□□□□ 0.03
EIF3E-204ENST00000518442 TRIM41Q8WV44 630 aa15.19■□□□□ 0.02
EIF3E-204ENST00000518442 GAPVD1Q14C86 1478 aa15.19■□□□□ 0.02
EIF3E-204ENST00000518442 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
EIF3E-204ENST00000518442 GRIN2BQ13224 1484 aa15.15■□□□□ 0.02
EIF3E-204ENST00000518442 ABCA5Q8WWZ7 1642 aa15.15■□□□□ 0.02
EIF3E-204ENST00000518442 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
EIF3E-204ENST00000518442 DNAJC5Q9H3Z4 198 aa15.13■□□□□ 0.01
EIF3E-204ENST00000518442 CHD1O14646 1710 aa15.1■□□□□ 0.01
EIF3E-204ENST00000518442 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
EIF3E-204ENST00000518442 CHMP7Q8WUX9 453 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms