RNA–Protein interactions for RNA: ENST00000518345.1

EIF3E-203, Transcript of eukaryotic translation initiation factor 3 subunit E, humanhuman

TSL 3

Gene EIF3E, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3E-203ENST00000518345 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
EIF3E-203ENST00000518345 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
EIF3E-203ENST00000518345 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
EIF3E-203ENST00000518345 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
EIF3E-203ENST00000518345 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
EIF3E-203ENST00000518345 FOXD1Q16676 465 aa20.39■□□□□ 0.85
EIF3E-203ENST00000518345 CCDC180Q9P1Z9 1646 aa20■□□□□ 0.79
EIF3E-203ENST00000518345 POTEDQ86YR6 584 aa19.78■□□□□ 0.76
EIF3E-203ENST00000518345 ABCC9O60706 1549 aa19.66■□□□□ 0.74
EIF3E-203ENST00000518345 MSH5O43196 834 aa19.3■□□□□ 0.68
EIF3E-203ENST00000518345 PIAS4Q8N2W9 510 aaPredicted RBP18.88■□□□□ 0.61
EIF3E-203ENST00000518345 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
EIF3E-203ENST00000518345 NACADO15069 1562 aa18.77■□□□□ 0.6
EIF3E-203ENST00000518345 PPP6R1Q9UPN7 881 aa18.65■□□□□ 0.58
EIF3E-203ENST00000518345 PLPPR3Q6T4P5 718 aa18.63■□□□□ 0.57
EIF3E-203ENST00000518345 MYO15BQ96JP2 1530 aa18.61■□□□□ 0.57
EIF3E-203ENST00000518345 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.57
EIF3E-203ENST00000518345 DCAF8L2P0C7V8 631 aa18.54■□□□□ 0.56
EIF3E-203ENST00000518345 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
EIF3E-203ENST00000518345 ADRA2BP18089 450 aa18.52■□□□□ 0.56
EIF3E-203ENST00000518345 DCAF1Q9Y4B6 1507 aa18.47■□□□□ 0.55
EIF3E-203ENST00000518345 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
EIF3E-203ENST00000518345 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
EIF3E-203ENST00000518345 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
EIF3E-203ENST00000518345 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
EIF3E-203ENST00000518345 SHROOM4Q9ULL8 1493 aa18.09■□□□□ 0.49
EIF3E-203ENST00000518345 EIF4G1Q04637 1599 aaKnown RBP17.84■□□□□ 0.45
EIF3E-203ENST00000518345 CC2D2AQ9P2K1 1620 aa17.82■□□□□ 0.44
EIF3E-203ENST00000518345 CECR2Q9BXF3 1484 aa17.67■□□□□ 0.42
EIF3E-203ENST00000518345 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
EIF3E-203ENST00000518345 BAZ1AQ9NRL2 1556 aaPredicted RBP17.32■□□□□ 0.36
EIF3E-203ENST00000518345 NCAPD3P42695 1498 aa17.3■□□□□ 0.36
EIF3E-203ENST00000518345 ATAD2BQ9ULI0 1458 aa17.3■□□□□ 0.36
EIF3E-203ENST00000518345 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
EIF3E-203ENST00000518345 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
EIF3E-203ENST00000518345 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
EIF3E-203ENST00000518345 DMRT2Q9Y5R5 561 aa17.22■□□□□ 0.35
EIF3E-203ENST00000518345 MROH2BQ7Z745 1585 aa17.21■□□□□ 0.35
EIF3E-203ENST00000518345 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
EIF3E-203ENST00000518345 BAZ1BQ9UIG0 1483 aaKnown RBP17.14■□□□□ 0.33
EIF3E-203ENST00000518345 WIZO95785 1651 aa17.04■□□□□ 0.32
EIF3E-203ENST00000518345 NESP48681 1621 aa16.98■□□□□ 0.31
EIF3E-203ENST00000518345 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.3
EIF3E-203ENST00000518345 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
EIF3E-203ENST00000518345 LAMC3Q9Y6N6 1575 aa16.92■□□□□ 0.3
EIF3E-203ENST00000518345 RSF1Q96T23 1441 aaPredicted RBP16.9■□□□□ 0.3
EIF3E-203ENST00000518345 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
EIF3E-203ENST00000518345 CUX2O14529 1486 aa16.86■□□□□ 0.29
EIF3E-203ENST00000518345 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
EIF3E-203ENST00000518345 TOP2AP11388 1531 aaKnown RBP16.84■□□□□ 0.29
EIF3E-203ENST00000518345 THOC2Q8NI27 1593 aaKnown RBP16.84■□□□□ 0.29
EIF3E-203ENST00000518345 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
EIF3E-203ENST00000518345 PDS5BQ9NTI5 1447 aa16.72■□□□□ 0.27
EIF3E-203ENST00000518345 CFTRP13569 1480 aa16.66■□□□□ 0.26
EIF3E-203ENST00000518345 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
EIF3E-203ENST00000518345 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
EIF3E-203ENST00000518345 WDR62O43379 1518 aa16.62■□□□□ 0.25
EIF3E-203ENST00000518345 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
EIF3E-203ENST00000518345 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
EIF3E-203ENST00000518345 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
EIF3E-203ENST00000518345 URB2Q14146 1524 aaKnown RBP16.49■□□□□ 0.23
EIF3E-203ENST00000518345 DNAJC5Q9H3Z4 198 aa16.46■□□□□ 0.23
EIF3E-203ENST00000518345 RNF39Q9H2S5 420 aa16.44■□□□□ 0.22
EIF3E-203ENST00000518345 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
EIF3E-203ENST00000518345 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
EIF3E-203ENST00000518345 TOPBP1Q92547 1522 aa16.34■□□□□ 0.21
EIF3E-203ENST00000518345 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
EIF3E-203ENST00000518345 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
EIF3E-203ENST00000518345 IFT140Q96RY7 1462 aa16.25■□□□□ 0.19
EIF3E-203ENST00000518345 PPP4R3CPQ6ZMV5 832 aa16.25■□□□□ 0.19
EIF3E-203ENST00000518345 SUPT5HO00267 1087 aaKnown RBP16.23■□□□□ 0.19
EIF3E-203ENST00000518345 ZNF608Q9ULD9 1512 aaPredicted RBP16.23■□□□□ 0.19
EIF3E-203ENST00000518345 TARBP1Q13395 1621 aaKnown RBP16.22■□□□□ 0.19
EIF3E-203ENST00000518345 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.19
EIF3E-203ENST00000518345 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
EIF3E-203ENST00000518345 C1QBPQ07021 282 aaKnown RBP16.17■□□□□ 0.18
EIF3E-203ENST00000518345 CUX1P39880 1505 aa16.17■□□□□ 0.18
EIF3E-203ENST00000518345 FGD5Q6ZNL6 1462 aa16.12■□□□□ 0.17
EIF3E-203ENST00000518345 WDR97A6NE52 1622 aa16.1■□□□□ 0.17
EIF3E-203ENST00000518345 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
EIF3E-203ENST00000518345 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
EIF3E-203ENST00000518345 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
EIF3E-203ENST00000518345 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.16
EIF3E-203ENST00000518345 CHD1O14646 1710 aa16.05■□□□□ 0.16
EIF3E-203ENST00000518345 SOGA1O94964 1423 aa16.05■□□□□ 0.16
EIF3E-203ENST00000518345 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
EIF3E-203ENST00000518345 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
EIF3E-203ENST00000518345 SYNJ1O43426 1573 aa15.99■□□□□ 0.15
EIF3E-203ENST00000518345 TDRD9Q8NDG6 1382 aaKnown RBP15.99■□□□□ 0.15
EIF3E-203ENST00000518345 PBRM1Q86U86 1689 aa15.99■□□□□ 0.15
EIF3E-203ENST00000518345 TOP2BQ02880 1626 aa15.98■□□□□ 0.15
EIF3E-203ENST00000518345 ABCA5Q8WWZ7 1642 aa15.97■□□□□ 0.15
EIF3E-203ENST00000518345 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.14
EIF3E-203ENST00000518345 ABCA10Q8WWZ4 1543 aa15.95■□□□□ 0.14
EIF3E-203ENST00000518345 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.14
EIF3E-203ENST00000518345 RIMBP3CA6NJZ7 1639 aa15.93■□□□□ 0.14
EIF3E-203ENST00000518345 RIMBP3BA6NNM3 1639 aa15.93■□□□□ 0.14
EIF3E-203ENST00000518345 RIMBP3Q9UFD9 1639 aa15.93■□□□□ 0.14
EIF3E-203ENST00000518345 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
EIF3E-203ENST00000518345 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms