Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
NSUN3Q9H649 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
NSUN3Q9H649 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NSUN3Q9H649 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.33■■□□□ 1.81
NSUN3Q9H649 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NSUN3Q9H649 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NSUN3Q9H649 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
NSUN3Q9H649 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.32■■□□□ 1.8
NSUN3Q9H649 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NSUN3Q9H649 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.31■■□□□ 1.8
NSUN3Q9H649 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NSUN3Q9H649 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NSUN3Q9H649 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
NSUN3Q9H649 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NSUN3Q9H649 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
NSUN3Q9H649 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
NSUN3Q9H649 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NSUN3Q9H649 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
NSUN3Q9H649 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NSUN3Q9H649 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
NSUN3Q9H649 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NSUN3Q9H649 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
NSUN3Q9H649 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NSUN3Q9H649 MIR935-201ENST00000401179 91 ntBASIC26.29■■□□□ 1.8
NSUN3Q9H649 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NSUN3Q9H649 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
NSUN3Q9H649 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.28■■□□□ 1.8
NSUN3Q9H649 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.28■■□□□ 1.8
NSUN3Q9H649 AC239859.2-201ENST00000444165 318 ntBASIC26.27■■□□□ 1.8
NSUN3Q9H649 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.27■■□□□ 1.8
NSUN3Q9H649 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NSUN3Q9H649 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.27■■□□□ 1.8
NSUN3Q9H649 ABCB10P1-201ENST00000614297 2181 ntBASIC26.27■■□□□ 1.8
NSUN3Q9H649 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
NSUN3Q9H649 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
NSUN3Q9H649 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.26■■□□□ 1.79
NSUN3Q9H649 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.25■■□□□ 1.79
NSUN3Q9H649 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NSUN3Q9H649 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NSUN3Q9H649 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NSUN3Q9H649 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.24■■□□□ 1.79
NSUN3Q9H649 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.24■■□□□ 1.79
NSUN3Q9H649 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
NSUN3Q9H649 AC019171.1-201ENST00000601251 1056 ntBASIC26.24■■□□□ 1.79
NSUN3Q9H649 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.24■■□□□ 1.79
NSUN3Q9H649 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
NSUN3Q9H649 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NSUN3Q9H649 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.23■■□□□ 1.79
NSUN3Q9H649 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
NSUN3Q9H649 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NSUN3Q9H649 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NSUN3Q9H649 AC008406.3-201ENST00000620001 1374 ntBASIC26.22■■□□□ 1.79
NSUN3Q9H649 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NSUN3Q9H649 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
NSUN3Q9H649 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.22■■□□□ 1.79
NSUN3Q9H649 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NSUN3Q9H649 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
NSUN3Q9H649 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
NSUN3Q9H649 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NSUN3Q9H649 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.21■■□□□ 1.79
NSUN3Q9H649 Z92544.1-202ENST00000571933 1220 ntBASIC26.21■■□□□ 1.79
NSUN3Q9H649 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NSUN3Q9H649 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.2■■□□□ 1.79
NSUN3Q9H649 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
NSUN3Q9H649 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
NSUN3Q9H649 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.2■■□□□ 1.78
NSUN3Q9H649 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.2■■□□□ 1.78
NSUN3Q9H649 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NSUN3Q9H649 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
NSUN3Q9H649 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NSUN3Q9H649 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.19■■□□□ 1.78
NSUN3Q9H649 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
NSUN3Q9H649 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
NSUN3Q9H649 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NSUN3Q9H649 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.18■■□□□ 1.78
NSUN3Q9H649 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.18■■□□□ 1.78
NSUN3Q9H649 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
NSUN3Q9H649 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NSUN3Q9H649 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.17■■□□□ 1.78
NSUN3Q9H649 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.17■■□□□ 1.78
NSUN3Q9H649 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NSUN3Q9H649 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
NSUN3Q9H649 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.16■■□□□ 1.78
NSUN3Q9H649 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
NSUN3Q9H649 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
NSUN3Q9H649 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NSUN3Q9H649 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.15■■□□□ 1.78
NSUN3Q9H649 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NSUN3Q9H649 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.15■■□□□ 1.78
NSUN3Q9H649 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.15■■□□□ 1.78
NSUN3Q9H649 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.15■■□□□ 1.78
NSUN3Q9H649 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NSUN3Q9H649 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NSUN3Q9H649 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.14■■□□□ 1.78
NSUN3Q9H649 ST7-AS1-201ENST00000456775 1889 ntBASIC26.14■■□□□ 1.78
NSUN3Q9H649 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.14■■□□□ 1.77
NSUN3Q9H649 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
NSUN3Q9H649 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
NSUN3Q9H649 AL359504.2-201ENST00000605506 1601 ntBASIC26.14■■□□□ 1.77
NSUN3Q9H649 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms