Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP1S3Q96PC3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.37■□□□□ 0.53
AP1S3Q96PC3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP1S3Q96PC3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S3Q96PC3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S3Q96PC3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S3Q96PC3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
AP1S3Q96PC3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S3Q96PC3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S3Q96PC3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S3Q96PC3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.35■□□□□ 0.53
AP1S3Q96PC3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
AP1S3Q96PC3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S3Q96PC3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S3Q96PC3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S3Q96PC3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S3Q96PC3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S3Q96PC3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S3Q96PC3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S3Q96PC3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S3Q96PC3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
AP1S3Q96PC3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S3Q96PC3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S3Q96PC3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
AP1S3Q96PC3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
AP1S3Q96PC3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S3Q96PC3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S3Q96PC3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S3Q96PC3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.32■□□□□ 0.52
AP1S3Q96PC3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP1S3Q96PC3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP1S3Q96PC3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP1S3Q96PC3 AL391121.1-201ENST00000607967 1349 ntBASIC18.32■□□□□ 0.52
AP1S3Q96PC3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
AP1S3Q96PC3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
AP1S3Q96PC3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP1S3Q96PC3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP1S3Q96PC3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP1S3Q96PC3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP1S3Q96PC3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.3■□□□□ 0.52
AP1S3Q96PC3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP1S3Q96PC3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP1S3Q96PC3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP1S3Q96PC3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
AP1S3Q96PC3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP1S3Q96PC3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.3■□□□□ 0.52
AP1S3Q96PC3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP1S3Q96PC3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP1S3Q96PC3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP1S3Q96PC3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP1S3Q96PC3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.29■□□□□ 0.52
AP1S3Q96PC3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S3Q96PC3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
AP1S3Q96PC3 AL449106.1-201ENST00000608517 1980 ntBASIC18.28■□□□□ 0.52
AP1S3Q96PC3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S3Q96PC3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.28■□□□□ 0.52
AP1S3Q96PC3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S3Q96PC3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S3Q96PC3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
AP1S3Q96PC3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.27■□□□□ 0.52
AP1S3Q96PC3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S3Q96PC3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.27■□□□□ 0.52
AP1S3Q96PC3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S3Q96PC3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S3Q96PC3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
AP1S3Q96PC3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP1S3Q96PC3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S3Q96PC3 AC018358.1-201ENST00000631079 1402 ntBASIC18.26■□□□□ 0.51
AP1S3Q96PC3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
AP1S3Q96PC3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
AP1S3Q96PC3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S3Q96PC3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S3Q96PC3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
AP1S3Q96PC3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S3Q96PC3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S3Q96PC3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
AP1S3Q96PC3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S3Q96PC3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S3Q96PC3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S3Q96PC3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S3Q96PC3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S3Q96PC3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
AP1S3Q96PC3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms