Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDH19Q8TAB3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDH19Q8TAB3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PCDH19Q8TAB3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDH19Q8TAB3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDH19Q8TAB3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDH19Q8TAB3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
PCDH19Q8TAB3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDH19Q8TAB3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDH19Q8TAB3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDH19Q8TAB3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDH19Q8TAB3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
PCDH19Q8TAB3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.38■■□□□ 1.65
PCDH19Q8TAB3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
PCDH19Q8TAB3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.38■■□□□ 1.65
PCDH19Q8TAB3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDH19Q8TAB3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDH19Q8TAB3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.37■■□□□ 1.65
PCDH19Q8TAB3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDH19Q8TAB3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH19Q8TAB3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH19Q8TAB3 HSD17B1P1-201ENST00000590052 955 ntBASIC25.36■■□□□ 1.65
PCDH19Q8TAB3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH19Q8TAB3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH19Q8TAB3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH19Q8TAB3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
PCDH19Q8TAB3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH19Q8TAB3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH19Q8TAB3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDH19Q8TAB3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
PCDH19Q8TAB3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDH19Q8TAB3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDH19Q8TAB3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDH19Q8TAB3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDH19Q8TAB3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.34■■□□□ 1.65
PCDH19Q8TAB3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDH19Q8TAB3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDH19Q8TAB3 AL359504.2-201ENST00000605506 1601 ntBASIC25.34■■□□□ 1.65
PCDH19Q8TAB3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.34■■□□□ 1.65
PCDH19Q8TAB3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.33■■□□□ 1.65
PCDH19Q8TAB3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH19Q8TAB3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH19Q8TAB3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDH19Q8TAB3 AC092803.2-201ENST00000564287 1899 ntBASIC25.32■■□□□ 1.64
PCDH19Q8TAB3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH19Q8TAB3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.32■■□□□ 1.64
PCDH19Q8TAB3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PCDH19Q8TAB3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
PCDH19Q8TAB3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH19Q8TAB3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH19Q8TAB3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH19Q8TAB3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH19Q8TAB3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH19Q8TAB3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH19Q8TAB3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH19Q8TAB3 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.31■■□□□ 1.64
PCDH19Q8TAB3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH19Q8TAB3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH19Q8TAB3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH19Q8TAB3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH19Q8TAB3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH19Q8TAB3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH19Q8TAB3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH19Q8TAB3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH19Q8TAB3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH19Q8TAB3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
PCDH19Q8TAB3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH19Q8TAB3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PCDH19Q8TAB3 AC126177.7-201ENST00000547904 679 ntBASIC25.3■■□□□ 1.64
PCDH19Q8TAB3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PCDH19Q8TAB3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH19Q8TAB3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDH19Q8TAB3 AC145676.1-201ENST00000514988 2004 ntBASIC25.29■■□□□ 1.64
PCDH19Q8TAB3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH19Q8TAB3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PCDH19Q8TAB3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH19Q8TAB3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH19Q8TAB3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDH19Q8TAB3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH19Q8TAB3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH19Q8TAB3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH19Q8TAB3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH19Q8TAB3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDH19Q8TAB3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH19Q8TAB3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH19Q8TAB3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH19Q8TAB3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH19Q8TAB3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH19Q8TAB3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.26■■□□□ 1.63
PCDH19Q8TAB3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.25■■□□□ 1.63
PCDH19Q8TAB3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDH19Q8TAB3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH19Q8TAB3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH19Q8TAB3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH19Q8TAB3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDH19Q8TAB3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH19Q8TAB3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH19Q8TAB3 DUSP8P4-201ENST00000399538 1761 ntBASIC25.24■■□□□ 1.63
PCDH19Q8TAB3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDH19Q8TAB3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms