Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
LSMEM1Q8N8F7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LSMEM1Q8N8F7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LSMEM1Q8N8F7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
LSMEM1Q8N8F7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LSMEM1Q8N8F7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LSMEM1Q8N8F7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.44■■□□□ 1.18
LSMEM1Q8N8F7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LSMEM1Q8N8F7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LSMEM1Q8N8F7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LSMEM1Q8N8F7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LSMEM1Q8N8F7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LSMEM1Q8N8F7 AC092803.2-201ENST00000564287 1899 ntBASIC22.43■■□□□ 1.18
LSMEM1Q8N8F7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
LSMEM1Q8N8F7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.42■■□□□ 1.18
LSMEM1Q8N8F7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LSMEM1Q8N8F7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.42■■□□□ 1.18
LSMEM1Q8N8F7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.42■■□□□ 1.18
LSMEM1Q8N8F7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
LSMEM1Q8N8F7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.42■■□□□ 1.18
LSMEM1Q8N8F7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LSMEM1Q8N8F7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LSMEM1Q8N8F7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LSMEM1Q8N8F7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.41■■□□□ 1.18
LSMEM1Q8N8F7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
LSMEM1Q8N8F7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
LSMEM1Q8N8F7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
LSMEM1Q8N8F7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LSMEM1Q8N8F7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LSMEM1Q8N8F7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LSMEM1Q8N8F7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LSMEM1Q8N8F7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LSMEM1Q8N8F7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
LSMEM1Q8N8F7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LSMEM1Q8N8F7 DUSP8P4-201ENST00000399538 1761 ntBASIC22.4■■□□□ 1.18
LSMEM1Q8N8F7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
LSMEM1Q8N8F7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LSMEM1Q8N8F7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LSMEM1Q8N8F7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
LSMEM1Q8N8F7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.39■■□□□ 1.17
LSMEM1Q8N8F7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LSMEM1Q8N8F7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
LSMEM1Q8N8F7 AC016575.1-201ENST00000607026 382 ntBASIC22.38■■□□□ 1.17
LSMEM1Q8N8F7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.38■■□□□ 1.17
LSMEM1Q8N8F7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LSMEM1Q8N8F7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.38■■□□□ 1.17
LSMEM1Q8N8F7 AL359258.2-201ENST00000564063 1566 ntBASIC22.38■■□□□ 1.17
LSMEM1Q8N8F7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LSMEM1Q8N8F7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
LSMEM1Q8N8F7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
LSMEM1Q8N8F7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.37■■□□□ 1.17
LSMEM1Q8N8F7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LSMEM1Q8N8F7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LSMEM1Q8N8F7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.36■■□□□ 1.17
LSMEM1Q8N8F7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
LSMEM1Q8N8F7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LSMEM1Q8N8F7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
LSMEM1Q8N8F7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LSMEM1Q8N8F7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
LSMEM1Q8N8F7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LSMEM1Q8N8F7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LSMEM1Q8N8F7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.34■■□□□ 1.17
LSMEM1Q8N8F7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LSMEM1Q8N8F7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.34■■□□□ 1.17
LSMEM1Q8N8F7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
LSMEM1Q8N8F7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LSMEM1Q8N8F7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LSMEM1Q8N8F7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
LSMEM1Q8N8F7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LSMEM1Q8N8F7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
LSMEM1Q8N8F7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
LSMEM1Q8N8F7 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.33■■□□□ 1.17
LSMEM1Q8N8F7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LSMEM1Q8N8F7 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.33■■□□□ 1.17
LSMEM1Q8N8F7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LSMEM1Q8N8F7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LSMEM1Q8N8F7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LSMEM1Q8N8F7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.31■■□□□ 1.16
LSMEM1Q8N8F7 AC126177.7-201ENST00000547904 679 ntBASIC22.31■■□□□ 1.16
LSMEM1Q8N8F7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
LSMEM1Q8N8F7 MIR7108-201ENST00000614319 87 ntBASIC22.31■■□□□ 1.16
LSMEM1Q8N8F7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LSMEM1Q8N8F7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.31■■□□□ 1.16
LSMEM1Q8N8F7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
LSMEM1Q8N8F7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.3■■□□□ 1.16
LSMEM1Q8N8F7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LSMEM1Q8N8F7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms