Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.56■■□□□ 1.84
VPS52Q8N1B4 RAP2CP1-202ENST00000605179 643 ntBASIC26.56■■□□□ 1.84
VPS52Q8N1B4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
VPS52Q8N1B4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
VPS52Q8N1B4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS52Q8N1B4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.55■■□□□ 1.84
VPS52Q8N1B4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
VPS52Q8N1B4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS52Q8N1B4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
VPS52Q8N1B4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
VPS52Q8N1B4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.54■■□□□ 1.84
VPS52Q8N1B4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VPS52Q8N1B4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.54■■□□□ 1.84
VPS52Q8N1B4 AC142086.6-201ENST00000621154 1765 ntBASIC26.53■■□□□ 1.84
VPS52Q8N1B4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS52Q8N1B4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
VPS52Q8N1B4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS52Q8N1B4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.53■■□□□ 1.84
VPS52Q8N1B4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS52Q8N1B4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS52Q8N1B4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS52Q8N1B4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.53■■□□□ 1.84
VPS52Q8N1B4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.52■■□□□ 1.84
VPS52Q8N1B4 SPCS2P3-201ENST00000500401 656 ntBASIC26.52■■□□□ 1.84
VPS52Q8N1B4 MIR3960-201ENST00000583311 91 ntBASIC26.52■■□□□ 1.84
VPS52Q8N1B4 BHLHE23-202ENST00000612929 1109 ntBASIC26.52■■□□□ 1.84
VPS52Q8N1B4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.84
VPS52Q8N1B4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
VPS52Q8N1B4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
VPS52Q8N1B4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
VPS52Q8N1B4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.5■■□□□ 1.83
VPS52Q8N1B4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
VPS52Q8N1B4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
VPS52Q8N1B4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
VPS52Q8N1B4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VPS52Q8N1B4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS52Q8N1B4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.49■■□□□ 1.83
VPS52Q8N1B4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS52Q8N1B4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.49■■□□□ 1.83
VPS52Q8N1B4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.49■■□□□ 1.83
VPS52Q8N1B4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.48■■□□□ 1.83
VPS52Q8N1B4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
VPS52Q8N1B4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
VPS52Q8N1B4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.48■■□□□ 1.83
VPS52Q8N1B4 DRD5P2-201ENST00000421395 2012 ntBASIC26.48■■□□□ 1.83
VPS52Q8N1B4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS52Q8N1B4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS52Q8N1B4 AC010980.1-201ENST00000587192 1142 ntBASIC26.47■■□□□ 1.83
VPS52Q8N1B4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.47■■□□□ 1.83
VPS52Q8N1B4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS52Q8N1B4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
VPS52Q8N1B4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
VPS52Q8N1B4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
VPS52Q8N1B4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
VPS52Q8N1B4 AL035685.1-201ENST00000636663 812 ntBASIC26.46■■□□□ 1.83
VPS52Q8N1B4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VPS52Q8N1B4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.46■■□□□ 1.83
VPS52Q8N1B4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
VPS52Q8N1B4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.45■■□□□ 1.82
VPS52Q8N1B4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
VPS52Q8N1B4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.45■■□□□ 1.82
VPS52Q8N1B4 AL451085.2-201ENST00000605085 799 ntBASIC26.45■■□□□ 1.82
VPS52Q8N1B4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
VPS52Q8N1B4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.82
VPS52Q8N1B4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
VPS52Q8N1B4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
VPS52Q8N1B4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
VPS52Q8N1B4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VPS52Q8N1B4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VPS52Q8N1B4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
VPS52Q8N1B4 MIR6765-201ENST00000614092 87 ntBASIC26.43■■□□□ 1.82
VPS52Q8N1B4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.43■■□□□ 1.82
VPS52Q8N1B4 AC074183.2-201ENST00000623112 922 ntBASIC26.42■■□□□ 1.82
VPS52Q8N1B4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.42■■□□□ 1.82
VPS52Q8N1B4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS52Q8N1B4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS52Q8N1B4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
VPS52Q8N1B4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
VPS52Q8N1B4 AC139795.1-202ENST00000500444 432 ntBASIC26.41■■□□□ 1.82
VPS52Q8N1B4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.41■■□□□ 1.82
VPS52Q8N1B4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS52Q8N1B4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS52Q8N1B4 KRT8P33-201ENST00000508125 1423 ntBASIC26.4■■□□□ 1.82
VPS52Q8N1B4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
VPS52Q8N1B4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
VPS52Q8N1B4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.4■■□□□ 1.82
VPS52Q8N1B4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
VPS52Q8N1B4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
VPS52Q8N1B4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VPS52Q8N1B4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VPS52Q8N1B4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.39■■□□□ 1.82
VPS52Q8N1B4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.39■■□□□ 1.82
VPS52Q8N1B4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.39■■□□□ 1.81
VPS52Q8N1B4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
VPS52Q8N1B4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.38■■□□□ 1.81
VPS52Q8N1B4 AC018755.3-202ENST00000596210 929 ntBASIC26.38■■□□□ 1.81
VPS52Q8N1B4 AL359504.2-201ENST00000605506 1601 ntBASIC26.38■■□□□ 1.81
VPS52Q8N1B4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
VPS52Q8N1B4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
VPS52Q8N1B4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms