Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SCUBE3Q8IX30 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SCUBE3Q8IX30 AC142472.1-201ENST00000612013 1741 ntBASIC25.89■■□□□ 1.74
SCUBE3Q8IX30 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.88■■□□□ 1.73
SCUBE3Q8IX30 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.88■■□□□ 1.73
SCUBE3Q8IX30 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.88■■□□□ 1.73
SCUBE3Q8IX30 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SCUBE3Q8IX30 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.88■■□□□ 1.73
SCUBE3Q8IX30 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SCUBE3Q8IX30 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SCUBE3Q8IX30 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.87■■□□□ 1.73
SCUBE3Q8IX30 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SCUBE3Q8IX30 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SCUBE3Q8IX30 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SCUBE3Q8IX30 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SCUBE3Q8IX30 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SCUBE3Q8IX30 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
SCUBE3Q8IX30 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.86■■□□□ 1.73
SCUBE3Q8IX30 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SCUBE3Q8IX30 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SCUBE3Q8IX30 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.85■■□□□ 1.73
SCUBE3Q8IX30 ECEL1P2-201ENST00000461596 1295 ntBASIC25.85■■□□□ 1.73
SCUBE3Q8IX30 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SCUBE3Q8IX30 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SCUBE3Q8IX30 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SCUBE3Q8IX30 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
SCUBE3Q8IX30 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.84■■□□□ 1.73
SCUBE3Q8IX30 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.84■■□□□ 1.73
SCUBE3Q8IX30 RNF126P1-201ENST00000567452 1320 ntBASIC25.84■■□□□ 1.73
SCUBE3Q8IX30 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SCUBE3Q8IX30 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.83■■□□□ 1.73
SCUBE3Q8IX30 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.83■■□□□ 1.73
SCUBE3Q8IX30 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SCUBE3Q8IX30 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
SCUBE3Q8IX30 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SCUBE3Q8IX30 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SCUBE3Q8IX30 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.81■■□□□ 1.72
SCUBE3Q8IX30 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SCUBE3Q8IX30 SMPD5-203ENST00000639008 1464 ntBASIC25.81■■□□□ 1.72
SCUBE3Q8IX30 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SCUBE3Q8IX30 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SCUBE3Q8IX30 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.81■■□□□ 1.72
SCUBE3Q8IX30 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SCUBE3Q8IX30 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SCUBE3Q8IX30 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.8■■□□□ 1.72
SCUBE3Q8IX30 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.8■■□□□ 1.72
SCUBE3Q8IX30 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.8■■□□□ 1.72
SCUBE3Q8IX30 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
SCUBE3Q8IX30 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
SCUBE3Q8IX30 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SCUBE3Q8IX30 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
SCUBE3Q8IX30 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SCUBE3Q8IX30 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.79■■□□□ 1.72
SCUBE3Q8IX30 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SCUBE3Q8IX30 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.79■■□□□ 1.72
SCUBE3Q8IX30 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SCUBE3Q8IX30 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SCUBE3Q8IX30 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
SCUBE3Q8IX30 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.78■■□□□ 1.72
SCUBE3Q8IX30 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.78■■□□□ 1.72
SCUBE3Q8IX30 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.78■■□□□ 1.72
SCUBE3Q8IX30 AC025884.2-201ENST00000553429 711 ntBASIC25.78■■□□□ 1.72
SCUBE3Q8IX30 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SCUBE3Q8IX30 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SCUBE3Q8IX30 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SCUBE3Q8IX30 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
SCUBE3Q8IX30 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.77■■□□□ 1.72
SCUBE3Q8IX30 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SCUBE3Q8IX30 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SCUBE3Q8IX30 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SCUBE3Q8IX30 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.76■■□□□ 1.71
SCUBE3Q8IX30 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.76■■□□□ 1.71
SCUBE3Q8IX30 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.75■■□□□ 1.71
SCUBE3Q8IX30 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SCUBE3Q8IX30 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
SCUBE3Q8IX30 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCUBE3Q8IX30 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.74■■□□□ 1.71
SCUBE3Q8IX30 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCUBE3Q8IX30 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.74■■□□□ 1.71
SCUBE3Q8IX30 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCUBE3Q8IX30 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
SCUBE3Q8IX30 RARRES2P2-201ENST00000394842 485 ntBASIC25.73■■□□□ 1.71
SCUBE3Q8IX30 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SCUBE3Q8IX30 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SCUBE3Q8IX30 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
SCUBE3Q8IX30 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.72■■□□□ 1.71
SCUBE3Q8IX30 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCUBE3Q8IX30 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCUBE3Q8IX30 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.72■■□□□ 1.71
SCUBE3Q8IX30 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCUBE3Q8IX30 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
SCUBE3Q8IX30 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SCUBE3Q8IX30 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.71■■□□□ 1.71
SCUBE3Q8IX30 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.71■■□□□ 1.71
SCUBE3Q8IX30 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.71■■□□□ 1.71
SCUBE3Q8IX30 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.71■■□□□ 1.71
SCUBE3Q8IX30 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCUBE3Q8IX30 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCUBE3Q8IX30 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCUBE3Q8IX30 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms