Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.06■□□□□ 0.488e-7■■□□□ 13.7
DDX42Q86XP3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18■□□□□ 0.478e-7■■□□□ 13.7
DDX42Q86XP3 HNRNPAB-203ENST00000504796 578 ntTSL 29.07□□□□□ -0.968e-7■■□□□ 13.7
DDX42Q86XP3 OGT-203ENST00000444774 556 ntTSL 411.49□□□□□ -0.571e-6■■□□□ 13.7
DDX42Q86XP3 OGT-211ENST00000498566 601 ntTSL 35.34□□□□□ -1.551e-6■■□□□ 13.7
DDX42Q86XP3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.076e-10■■□□□ 13.6
DDX42Q86XP3 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.77□□□□□ -1.016e-6■■□□□ 13.6
DDX42Q86XP3 GFPT1-204ENST00000494201 625 ntTSL 57.43□□□□□ -1.226e-6■■□□□ 13.6
DDX42Q86XP3 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.236e-6■■□□□ 13.6
DDX42Q86XP3 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.21e-6■■□□□ 13.5
DDX42Q86XP3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.411e-6■■□□□ 13.5
DDX42Q86XP3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.77■■■□□ 2.045e-6■■□□□ 13.5
DDX42Q86XP3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.045e-6■■□□□ 13.5
DDX42Q86XP3 ZNF706-215ENST00000523922 493 ntTSL 323.96■■□□□ 1.435e-6■■□□□ 13.5
DDX42Q86XP3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.785e-6■■□□□ 13.5
DDX42Q86XP3 ZNF706-210ENST00000520454 488 ntTSL 319.54■□□□□ 0.725e-6■■□□□ 13.5
DDX42Q86XP3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.32■□□□□ 0.685e-6■■□□□ 13.5
DDX42Q86XP3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.225e-6■■□□□ 13.5
DDX42Q86XP3 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.095e-6■■□□□ 13.5
DDX42Q86XP3 ZNF706-208ENST00000519916 597 ntTSL 210.6□□□□□ -0.715e-6■■□□□ 13.5
DDX42Q86XP3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.295e-6■■□□□ 13.5
DDX42Q86XP3 ZNF706-214ENST00000523146 476 ntTSL 53.38□□□□□ -1.875e-6■■□□□ 13.5
DDX42Q86XP3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.65e-9■■□□□ 13.2
DDX42Q86XP3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.065e-9■■□□□ 13.2
DDX42Q86XP3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.265e-9■■□□□ 13.2
DDX42Q86XP3 OAZ1-203ENST00000586054 2832 nt22.89■■□□□ 1.257e-11■■□□□ 13.2
DDX42Q86XP3 MOB1B-205ENST00000511449 627 ntTSL 318.04■□□□□ 0.481e-9■■□□□ 13.1
DDX42Q86XP3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.04■□□□□ 0.481e-9■■□□□ 13.1
DDX42Q86XP3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.371e-9■■□□□ 13.1
DDX42Q86XP3 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.132e-6■■□□□ 13.1
DDX42Q86XP3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.244e-8■■□□□ 13.1
DDX42Q86XP3 MAP4-201ENST00000335271 1564 ntAPPRIS ALT2 TSL 215.86■□□□□ 0.134e-8■■□□□ 13.1
DDX42Q86XP3 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.214e-8■■□□□ 13.1
DDX42Q86XP3 MAP4-208ENST00000429422 3724 ntTSL 1 (best)11.94□□□□□ -0.54e-8■■□□□ 13.1
DDX42Q86XP3 MAP4-205ENST00000420772 3478 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.694e-8■■□□□ 13.1
DDX42Q86XP3 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.744e-8■■□□□ 13.1
DDX42Q86XP3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.823e-7■■□□□ 13.1
DDX42Q86XP3 ARFGAP1-214ENST00000520485 1548 ntTSL 223.79■■□□□ 1.46e-7■■□□□ 13
DDX42Q86XP3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.766e-7■■□□□ 13
DDX42Q86XP3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.536e-7■■□□□ 13
DDX42Q86XP3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.496e-7■■□□□ 13
DDX42Q86XP3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.67■□□□□ 0.426e-7■■□□□ 13
DDX42Q86XP3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.39■□□□□ 0.376e-7■■□□□ 13
DDX42Q86XP3 ARFGAP1-215ENST00000522403 995 ntTSL 516.88■□□□□ 0.296e-7■■□□□ 13
DDX42Q86XP3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.286e-7■■□□□ 13
DDX42Q86XP3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.246e-7■■□□□ 13
DDX42Q86XP3 FDPS-208ENST00000470171 746 ntTSL 216.4■□□□□ 0.226e-7■■□□□ 13
DDX42Q86XP3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.26e-7■■□□□ 13
DDX42Q86XP3 ARFGAP1-221ENST00000549047 1040 ntTSL 516.06■□□□□ 0.166e-7■■□□□ 13
DDX42Q86XP3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.156e-7■■□□□ 13
DDX42Q86XP3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.146e-7■■□□□ 13
DDX42Q86XP3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.136e-7■■□□□ 13
DDX42Q86XP3 FDPS-213ENST00000489003 976 ntTSL 215.85■□□□□ 0.136e-7■■□□□ 13
DDX42Q86XP3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.16e-7■■□□□ 13
DDX42Q86XP3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.54■□□□□ 0.086e-7■■□□□ 13
DDX42Q86XP3 FDPS-216ENST00000491013 912 ntTSL 515.49■□□□□ 0.076e-7■■□□□ 13
DDX42Q86XP3 HSPA9-212ENST00000523929 780 ntTSL 415.02■□□□□ -02e-13■■□□□ 13
DDX42Q86XP3 HSPA9-207ENST00000507097 1796 ntTSL 214.93□□□□□ -0.022e-13■■□□□ 13
DDX42Q86XP3 ARFGAP1-218ENST00000523460 572 ntTSL 414.88□□□□□ -0.036e-7■■□□□ 13
DDX42Q86XP3 SAR1A-203ENST00000373239 468 ntTSL 314.8□□□□□ -0.046e-7■■□□□ 13
DDX42Q86XP3 SRRT-206ENST00000460194 575 ntTSL 214.04□□□□□ -0.166e-7■■□□□ 13
DDX42Q86XP3 SLC39A7-204ENST00000463972 1410 ntTSL 214.02□□□□□ -0.166e-7■■□□□ 13
DDX42Q86XP3 FDPS-207ENST00000468479 938 ntTSL 213.87□□□□□ -0.196e-7■■□□□ 13
DDX42Q86XP3 ARFGAP1-206ENST00000518601 905 ntTSL 513.77□□□□□ -0.216e-7■■□□□ 13
DDX42Q86XP3 FDPS-204ENST00000461507 1022 ntTSL 213.39□□□□□ -0.276e-7■■□□□ 13
DDX42Q86XP3 FDPS-211ENST00000477057 741 ntTSL 213.31□□□□□ -0.286e-7■■□□□ 13
DDX42Q86XP3 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC13.27□□□□□ -0.296e-7■■□□□ 13
DDX42Q86XP3 FDPS-217ENST00000492244 673 ntTSL 312.61□□□□□ -0.396e-7■■□□□ 13
DDX42Q86XP3 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC12.5□□□□□ -0.416e-7■■□□□ 13
DDX42Q86XP3 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.632e-13■■□□□ 13
DDX42Q86XP3 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.746e-7■■□□□ 13
DDX42Q86XP3 FDPS-218ENST00000492887 554 ntTSL 28.28□□□□□ -1.086e-7■■□□□ 13
DDX42Q86XP3 HSPA9-202ENST00000501917 275 ntTSL 33.74□□□□□ -1.812e-13■■□□□ 13
DDX42Q86XP3 AARS-202ENST00000564359 590 ntTSL 310.83□□□□□ -0.685e-6■■□□□ 12.9
DDX42Q86XP3 HSPA5-201ENST00000324460 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.574e-7■■□□□ 12.8
DDX42Q86XP3 FAM208B-205ENST00000473789 506 ntTSL 525.51■■□□□ 1.673e-6■■□□□ 12.8
DDX42Q86XP3 FAM208B-210ENST00000496681 522 ntTSL 324.89■■□□□ 1.583e-6■■□□□ 12.8
DDX42Q86XP3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.87■■□□□ 1.093e-6■■□□□ 12.8
DDX42Q86XP3 FAM208B-207ENST00000480839 540 ntTSL 320.37■□□□□ 0.853e-6■■□□□ 12.8
DDX42Q86XP3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.48■□□□□ 0.713e-6■■□□□ 12.8
DDX42Q86XP3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.463e-6■■□□□ 12.8
DDX42Q86XP3 FAM208B-206ENST00000477043 514 ntTSL 217.74■□□□□ 0.433e-6■■□□□ 12.8
DDX42Q86XP3 DNAJB6-212ENST00000465908 694 ntTSL 316.97■□□□□ 0.313e-6■■□□□ 12.8
DDX42Q86XP3 DNAJB6-208ENST00000441561 1022 ntTSL 516.83■□□□□ 0.283e-6■■□□□ 12.8
DDX42Q86XP3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.7■□□□□ 0.263e-6■■□□□ 12.8
DDX42Q86XP3 PPP6R3-217ENST00000529344 603 ntTSL 416.59■□□□□ 0.253e-6■■□□□ 12.8
DDX42Q86XP3 PPP6R3-215ENST00000528635 538 ntTSL 416.59■□□□□ 0.253e-6■■□□□ 12.8
DDX42Q86XP3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.073e-6■■□□□ 12.8
DDX42Q86XP3 DNAJB6-213ENST00000468928 900 ntTSL 315.2■□□□□ 0.023e-6■■□□□ 12.8
DDX42Q86XP3 DNAJB6-211ENST00000459889 7992 ntTSL 1 (best)14.33□□□□□ -0.123e-6■■□□□ 12.8
DDX42Q86XP3 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.143e-6■■□□□ 12.8
DDX42Q86XP3 DNAJB6-214ENST00000486083 699 ntTSL 513.96□□□□□ -0.173e-6■■□□□ 12.8
DDX42Q86XP3 DNAJB6-202ENST00000412557 506 ntTSL 312.01□□□□□ -0.493e-6■■□□□ 12.8
DDX42Q86XP3 PPP6R3-220ENST00000530427 560 ntTSL 511.98□□□□□ -0.493e-6■■□□□ 12.8
DDX42Q86XP3 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC11.96□□□□□ -0.53e-6■■□□□ 12.8
DDX42Q86XP3 DNAJB6-207ENST00000441291 614 ntTSL 311.95□□□□□ -0.53e-6■■□□□ 12.8
DDX42Q86XP3 DNAJB6-203ENST00000417758 852 ntTSL 511.74□□□□□ -0.533e-6■■□□□ 12.8
DDX42Q86XP3 PPP6R3-205ENST00000524845 2771 ntTSL 1 (best) BASIC11.69□□□□□ -0.543e-6■■□□□ 12.8
DDX42Q86XP3 PPP6R3-201ENST00000265636 4794 ntTSL 1 (best) BASIC11.42□□□□□ -0.583e-6■■□□□ 12.8
DDX42Q86XP3 PPP6R3-226ENST00000534534 2968 ntTSL 2 BASIC11.3□□□□□ -0.63e-6■■□□□ 12.8
Retrieved 100 of 2,477 protein–RNA pairs in 99.6 ms