RNA–Protein interactions for RNA: ENST00000504796.1

HNRNPAB-203, Transcript of heterogeneous nuclear ribonucleoprotein A/B, humanhuman

TSL 2

Gene HNRNPAB, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPAB-203ENST00000504796 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
HNRNPAB-203ENST00000504796 CHIC1Q5VXU3 224 aa24.81■■□□□ 1.56
HNRNPAB-203ENST00000504796 SENP3Q9H4L4 574 aaPredicted RBP22.09■■□□□ 1.13
HNRNPAB-203ENST00000504796 PHF23Q9BUL5 403 aaPredicted RBP21.74■■□□□ 1.07
HNRNPAB-203ENST00000504796 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
HNRNPAB-203ENST00000504796 FOXD1Q16676 465 aa20.46■□□□□ 0.87
HNRNPAB-203ENST00000504796 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
HNRNPAB-203ENST00000504796 PPP6R1Q9UPN7 881 aa19.26■□□□□ 0.67
HNRNPAB-203ENST00000504796 ADRA2BP18089 450 aa19.21■□□□□ 0.67
HNRNPAB-203ENST00000504796 PIAS4Q8N2W9 510 aaPredicted RBP19.21■□□□□ 0.67
HNRNPAB-203ENST00000504796 MSH5O43196 834 aa19.17■□□□□ 0.66
HNRNPAB-203ENST00000504796 CCDC180Q9P1Z9 1646 aa18.63■□□□□ 0.57
HNRNPAB-203ENST00000504796 ABCC9O60706 1549 aa18.36■□□□□ 0.53
HNRNPAB-203ENST00000504796 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
HNRNPAB-203ENST00000504796 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
HNRNPAB-203ENST00000504796 DCAF8L2P0C7V8 631 aa17.6■□□□□ 0.41
HNRNPAB-203ENST00000504796 RB1CC1Q8TDY2 1594 aa17.58■□□□□ 0.41
HNRNPAB-203ENST00000504796 NACADO15069 1562 aa17.54■□□□□ 0.4
HNRNPAB-203ENST00000504796 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
HNRNPAB-203ENST00000504796 DMRT2Q9Y5R5 561 aa17.53■□□□□ 0.4
HNRNPAB-203ENST00000504796 PPP4R3CPQ6ZMV5 832 aa17.46■□□□□ 0.39
HNRNPAB-203ENST00000504796 ZCCHC6Q5VYS8 1495 aaKnown RBP17.42■□□□□ 0.38
HNRNPAB-203ENST00000504796 MYO15BQ96JP2 1530 aa17.41■□□□□ 0.38
HNRNPAB-203ENST00000504796 DCAF1Q9Y4B6 1507 aa17.31■□□□□ 0.36
HNRNPAB-203ENST00000504796 UNC13AQ9UPW8 1703 aa17.26■□□□□ 0.35
HNRNPAB-203ENST00000504796 PABPN1Q86U42 306 aaKnown RBP eCLIP17.16■□□□□ 0.34
HNRNPAB-203ENST00000504796 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
HNRNPAB-203ENST00000504796 BICRAQ9NZM4 1560 aa17.13■□□□□ 0.33
HNRNPAB-203ENST00000504796 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
HNRNPAB-203ENST00000504796 SCRIBQ14160 1630 aa17.01■□□□□ 0.31
HNRNPAB-203ENST00000504796 HOXD11P31277 338 aaPredicted RBP17■□□□□ 0.31
HNRNPAB-203ENST00000504796 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
HNRNPAB-203ENST00000504796 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
HNRNPAB-203ENST00000504796 SHROOM4Q9ULL8 1493 aa16.84■□□□□ 0.29
HNRNPAB-203ENST00000504796 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
HNRNPAB-203ENST00000504796 EIF4G1Q04637 1599 aaKnown RBP16.64■□□□□ 0.25
HNRNPAB-203ENST00000504796 NPM3O75607 178 aaKnown RBP16.64■□□□□ 0.25
HNRNPAB-203ENST00000504796 CC2D2AQ9P2K1 1620 aa16.61■□□□□ 0.25
HNRNPAB-203ENST00000504796 CECR2Q9BXF3 1484 aa16.49■□□□□ 0.23
HNRNPAB-203ENST00000504796 KCNA4P22459 653 aa16.49■□□□□ 0.23
HNRNPAB-203ENST00000504796 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
HNRNPAB-203ENST00000504796 SMARCA4P51532 1647 aa16.27■□□□□ 0.19
HNRNPAB-203ENST00000504796 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
HNRNPAB-203ENST00000504796 ATAD2BQ9ULI0 1458 aa16.21■□□□□ 0.19
HNRNPAB-203ENST00000504796 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.18
HNRNPAB-203ENST00000504796 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
HNRNPAB-203ENST00000504796 MROH2BQ7Z745 1585 aa16.16■□□□□ 0.18
HNRNPAB-203ENST00000504796 C1QBPQ07021 282 aaKnown RBP16.15■□□□□ 0.18
HNRNPAB-203ENST00000504796 SMARCA2P51531 1590 aa16.14■□□□□ 0.17
HNRNPAB-203ENST00000504796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.171e-6■■□□□ 12.6
HNRNPAB-203ENST00000504796 PEG3Q9GZU2 1588 aa16.11■□□□□ 0.17
HNRNPAB-203ENST00000504796 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
HNRNPAB-203ENST00000504796 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
HNRNPAB-203ENST00000504796 WIZO95785 1651 aa15.98■□□□□ 0.15
HNRNPAB-203ENST00000504796 RSF1Q96T23 1441 aaPredicted RBP15.93■□□□□ 0.14
HNRNPAB-203ENST00000504796 NESP48681 1621 aa15.89■□□□□ 0.13
HNRNPAB-203ENST00000504796 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
HNRNPAB-203ENST00000504796 SLC4A2P04920 1241 aa15.8■□□□□ 0.12
HNRNPAB-203ENST00000504796 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
HNRNPAB-203ENST00000504796 LAMC3Q9Y6N6 1575 aa15.78■□□□□ 0.12
HNRNPAB-203ENST00000504796 TOP2AP11388 1531 aaKnown RBP15.77■□□□□ 0.11
HNRNPAB-203ENST00000504796 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
HNRNPAB-203ENST00000504796 KIF21AQ7Z4S6 1674 aa15.68■□□□□ 0.1
HNRNPAB-203ENST00000504796 CUX2O14529 1486 aa15.66■□□□□ 0.1
HNRNPAB-203ENST00000504796 PDS5BQ9NTI5 1447 aa15.66■□□□□ 0.1
HNRNPAB-203ENST00000504796 SLC4A1APQ9BWU0 796 aaKnown RBP15.65■□□□□ 0.1
HNRNPAB-203ENST00000504796 THOC2Q8NI27 1593 aaKnown RBP15.64■□□□□ 0.09
HNRNPAB-203ENST00000504796 CFTRP13569 1480 aa15.62■□□□□ 0.09
HNRNPAB-203ENST00000504796 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
HNRNPAB-203ENST00000504796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.08
HNRNPAB-203ENST00000504796 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.08
HNRNPAB-203ENST00000504796 APLP2Q06481 763 aa15.55■□□□□ 0.08
HNRNPAB-203ENST00000504796 FANCD2Q9BXW9 1451 aa15.54■□□□□ 0.08
HNRNPAB-203ENST00000504796 MRC2Q9UBG0 1479 aa15.52■□□□□ 0.08
HNRNPAB-203ENST00000504796 CEP164Q9UPV0 1460 aa15.51■□□□□ 0.07
HNRNPAB-203ENST00000504796 WDR62O43379 1518 aa15.48■□□□□ 0.07
HNRNPAB-203ENST00000504796 SUPT5HO00267 1087 aaKnown RBP15.48■□□□□ 0.07
HNRNPAB-203ENST00000504796 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
HNRNPAB-203ENST00000504796 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
HNRNPAB-203ENST00000504796 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
HNRNPAB-203ENST00000504796 CAPN15O75808 1086 aa15.46■□□□□ 0.07
HNRNPAB-203ENST00000504796 MYCNP04198 464 aaPredicted RBP15.45■□□□□ 0.06
HNRNPAB-203ENST00000504796 URB2Q14146 1524 aaKnown RBP15.43■□□□□ 0.06
HNRNPAB-203ENST00000504796 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
HNRNPAB-203ENST00000504796 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
HNRNPAB-203ENST00000504796 DNAJC5Q9H3Z4 198 aa15.36■□□□□ 0.05
HNRNPAB-203ENST00000504796 DSG3P32926 999 aa15.35■□□□□ 0.05
HNRNPAB-203ENST00000504796 TOPBP1Q92547 1522 aa15.29■□□□□ 0.04
HNRNPAB-203ENST00000504796 DNMBPQ6XZF7 1577 aa15.25■□□□□ 0.03
HNRNPAB-203ENST00000504796 TRHP20396 242 aaPredicted RBP15.25■□□□□ 0.03
HNRNPAB-203ENST00000504796 ABCC8Q09428 1581 aa15.24■□□□□ 0.03
HNRNPAB-203ENST00000504796 IFT140Q96RY7 1462 aa15.2■□□□□ 0.02
HNRNPAB-203ENST00000504796 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
HNRNPAB-203ENST00000504796 ZBTB22O15209 634 aa15.16■□□□□ 0.02
HNRNPAB-203ENST00000504796 TARBP1Q13395 1621 aaKnown RBP15.16■□□□□ 0.02
HNRNPAB-203ENST00000504796 POLA1P09884 1462 aaPredicted RBP15.15■□□□□ 0.02
HNRNPAB-203ENST00000504796 CUX1P39880 1505 aa15.15■□□□□ 0.02
HNRNPAB-203ENST00000504796 RAD54L2Q9Y4B4 1467 aa15.11■□□□□ 0.01
HNRNPAB-203ENST00000504796 FGD5Q6ZNL6 1462 aa15.1■□□□□ 0.01
HNRNPAB-203ENST00000504796 ABCB7O75027 752 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms