RNA–Protein interactions for RNA: ENST00000530427.5

PPP6R3-220, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 5

Gene PPP6R3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-220ENST00000530427 NISCHQ9Y2I1 1504 aa26.76■■□□□ 1.87
PPP6R3-220ENST00000530427 AEBP2Q6ZN18 517 aaPredicted RBP26.01■■□□□ 1.75
PPP6R3-220ENST00000530427 CHIC1Q5VXU3 224 aa24.47■■□□□ 1.51
PPP6R3-220ENST00000530427 CCDC180Q9P1Z9 1646 aa23.74■■□□□ 1.39
PPP6R3-220ENST00000530427 ABCC9O60706 1549 aa22.92■■□□□ 1.26
PPP6R3-220ENST00000530427 ZCCHC6Q5VYS8 1495 aaKnown RBP22.35■■□□□ 1.17
PPP6R3-220ENST00000530427 MYO15BQ96JP2 1530 aa22.27■■□□□ 1.16
PPP6R3-220ENST00000530427 NACADO15069 1562 aa22.27■■□□□ 1.16
PPP6R3-220ENST00000530427 DCAF1Q9Y4B6 1507 aa22.26■■□□□ 1.15
PPP6R3-220ENST00000530427 DCAF8L2P0C7V8 631 aa22.25■■□□□ 1.15
PPP6R3-220ENST00000530427 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
PPP6R3-220ENST00000530427 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
PPP6R3-220ENST00000530427 DNAJC5BQ9UF47 199 aa22■■□□□ 1.11
PPP6R3-220ENST00000530427 PHF23Q9BUL5 403 aaPredicted RBP21.84■■□□□ 1.09
PPP6R3-220ENST00000530427 SCRIBQ14160 1630 aa21.55■■□□□ 1.04
PPP6R3-220ENST00000530427 UNC13AQ9UPW8 1703 aa21.52■■□□□ 1.03
PPP6R3-220ENST00000530427 SHROOM4Q9ULL8 1493 aa21.43■■□□□ 1.02
PPP6R3-220ENST00000530427 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
PPP6R3-220ENST00000530427 BICRAQ9NZM4 1560 aa21.31■■□□□ 1
PPP6R3-220ENST00000530427 EIF4G1Q04637 1599 aaKnown RBP20.82■□□□□ 0.92
PPP6R3-220ENST00000530427 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
PPP6R3-220ENST00000530427 CECR2Q9BXF3 1484 aa20.7■□□□□ 0.9
PPP6R3-220ENST00000530427 FOXD1Q16676 465 aa20.7■□□□□ 0.9
PPP6R3-220ENST00000530427 SMARCA4P51532 1647 aa20.69■□□□□ 0.9
PPP6R3-220ENST00000530427 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.89
PPP6R3-220ENST00000530427 SMARCA2P51531 1590 aa20.61■□□□□ 0.89
PPP6R3-220ENST00000530427 MROH2BQ7Z745 1585 aa20.54■□□□□ 0.88
PPP6R3-220ENST00000530427 DNAJC5Q9H3Z4 198 aa20.53■□□□□ 0.88
PPP6R3-220ENST00000530427 PEG3Q9GZU2 1588 aa20.53■□□□□ 0.88
PPP6R3-220ENST00000530427 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
PPP6R3-220ENST00000530427 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
PPP6R3-220ENST00000530427 RSF1Q96T23 1441 aaPredicted RBP20.47■□□□□ 0.87
PPP6R3-220ENST00000530427 HMGXB3Q12766 1538 aa20.44■□□□□ 0.86
PPP6R3-220ENST00000530427 BAZ1BQ9UIG0 1483 aaKnown RBP20.41■□□□□ 0.86
PPP6R3-220ENST00000530427 WIZO95785 1651 aa20.34■□□□□ 0.85
PPP6R3-220ENST00000530427 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
PPP6R3-220ENST00000530427 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
PPP6R3-220ENST00000530427 CCDC88BA6NC98 1476 aa19.95■□□□□ 0.78
PPP6R3-220ENST00000530427 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
PPP6R3-220ENST00000530427 CUX2O14529 1486 aa19.93■□□□□ 0.78
PPP6R3-220ENST00000530427 CADPSQ9ULU8 1353 aa19.92■□□□□ 0.78
PPP6R3-220ENST00000530427 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
PPP6R3-220ENST00000530427 CFTRP13569 1480 aa19.84■□□□□ 0.77
PPP6R3-220ENST00000530427 ERCC6Q03468 1493 aa19.79■□□□□ 0.76
PPP6R3-220ENST00000530427 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
PPP6R3-220ENST00000530427 NESP48681 1621 aa19.73■□□□□ 0.75
PPP6R3-220ENST00000530427 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
PPP6R3-220ENST00000530427 CEP164Q9UPV0 1460 aa19.66■□□□□ 0.74
PPP6R3-220ENST00000530427 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
PPP6R3-220ENST00000530427 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
PPP6R3-220ENST00000530427 MRC2Q9UBG0 1479 aa19.54■□□□□ 0.72
PPP6R3-220ENST00000530427 PLPPR3Q6T4P5 718 aa19.44■□□□□ 0.7
PPP6R3-220ENST00000530427 WDR62O43379 1518 aa19.43■□□□□ 0.7
PPP6R3-220ENST00000530427 THOC2Q8NI27 1593 aaKnown RBP19.43■□□□□ 0.7
PPP6R3-220ENST00000530427 DNMBPQ6XZF7 1577 aa19.4■□□□□ 0.7
PPP6R3-220ENST00000530427 MSH5O43196 834 aa19.4■□□□□ 0.7
PPP6R3-220ENST00000530427 TRIM41Q8WV44 630 aa19.39■□□□□ 0.69
PPP6R3-220ENST00000530427 WRNQ14191 1432 aaPredicted RBP eCLIP19.38■□□□□ 0.69
PPP6R3-220ENST00000530427 URB2Q14146 1524 aaKnown RBP19.35■□□□□ 0.69
PPP6R3-220ENST00000530427 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
PPP6R3-220ENST00000530427 POTEDQ86YR6 584 aa19.32■□□□□ 0.68
PPP6R3-220ENST00000530427 TOP2BQ02880 1626 aa19.28■□□□□ 0.68
PPP6R3-220ENST00000530427 CUX1P39880 1505 aa19.27■□□□□ 0.68
PPP6R3-220ENST00000530427 BIVM-ERCC5R4GMW8 1640 aa19.26■□□□□ 0.67
PPP6R3-220ENST00000530427 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
PPP6R3-220ENST00000530427 IFT140Q96RY7 1462 aa19.24■□□□□ 0.67
PPP6R3-220ENST00000530427 PPP6R1Q9UPN7 881 aa19.23■□□□□ 0.67
PPP6R3-220ENST00000530427 FGD5Q6ZNL6 1462 aa19.21■□□□□ 0.67
PPP6R3-220ENST00000530427 POLA1P09884 1462 aaPredicted RBP19.2■□□□□ 0.66
PPP6R3-220ENST00000530427 SOGA1O94964 1423 aa19.19■□□□□ 0.66
PPP6R3-220ENST00000530427 SYNJ1O43426 1573 aa19.19■□□□□ 0.66
PPP6R3-220ENST00000530427 WDR97A6NE52 1622 aa19.16■□□□□ 0.66
PPP6R3-220ENST00000530427 ADRA2BP18089 450 aa19.12■□□□□ 0.65
PPP6R3-220ENST00000530427 ABCA10Q8WWZ4 1543 aa19.09■□□□□ 0.65
PPP6R3-220ENST00000530427 TARBP1Q13395 1621 aaKnown RBP19.08■□□□□ 0.65
PPP6R3-220ENST00000530427 RAD54L2Q9Y4B4 1467 aa19.04■□□□□ 0.64
PPP6R3-220ENST00000530427 KIF27Q86VH2 1401 aa19.01■□□□□ 0.63
PPP6R3-220ENST00000530427 OSCARQ8IYS5 282 aa19.01■□□□□ 0.63
PPP6R3-220ENST00000530427 GAPVD1Q14C86 1478 aa18.98■□□□□ 0.63
PPP6R3-220ENST00000530427 EIF4G3O43432 1585 aaKnown RBP18.97■□□□□ 0.63
PPP6R3-220ENST00000530427 TDRD9Q8NDG6 1382 aaKnown RBP18.96■□□□□ 0.63
PPP6R3-220ENST00000530427 GRIN2BQ13224 1484 aa18.96■□□□□ 0.63
PPP6R3-220ENST00000530427 EEA1Q15075 1411 aa18.95■□□□□ 0.62
PPP6R3-220ENST00000530427 ZNF608Q9ULD9 1512 aaPredicted RBP18.95■□□□□ 0.62
PPP6R3-220ENST00000530427 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
PPP6R3-220ENST00000530427 AQRO60306 1485 aaKnown RBP eCLIP18.92■□□□□ 0.621e-6■□□□□ 11.2
PPP6R3-220ENST00000530427 ERICH3Q5RHP9 1530 aa18.91■□□□□ 0.62
PPP6R3-220ENST00000530427 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
PPP6R3-220ENST00000530427 PBRM1Q86U86 1689 aa18.87■□□□□ 0.61
PPP6R3-220ENST00000530427 CUL7Q14999 1698 aa18.82■□□□□ 0.6
PPP6R3-220ENST00000530427 SNAPC4Q5SXM2 1469 aa18.8■□□□□ 0.6
PPP6R3-220ENST00000530427 CHMP7Q8WUX9 453 aaPredicted RBP18.8■□□□□ 0.6
PPP6R3-220ENST00000530427 FHAD1B1AJZ9 1412 aa18.8■□□□□ 0.6
PPP6R3-220ENST00000530427 SYNJ2O15056 1496 aa18.78■□□□□ 0.6
PPP6R3-220ENST00000530427 IGF1RP08069 1367 aa18.78■□□□□ 0.6
PPP6R3-220ENST00000530427 CSRNP3Q8WYN3 585 aa18.76■□□□□ 0.59
PPP6R3-220ENST00000530427 CARMIL1Q5VZK9 1371 aa18.74■□□□□ 0.59
PPP6R3-220ENST00000530427 FBLN2P98095 1184 aa18.74■□□□□ 0.59
PPP6R3-220ENST00000530427 ADAMTS12P58397 1594 aa18.73■□□□□ 0.59
PPP6R3-220ENST00000530427 RIMBP3CA6NJZ7 1639 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms