RNA–Protein interactions for RNA: ENST00000534534.5

PPP6R3-226, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 2 BASIC

Gene PPP6R3, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-226ENST00000534534 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.67
PPP6R3-226ENST00000534534 CCDC180Q9P1Z9 1646 aa22.55■■□□□ 1.2
PPP6R3-226ENST00000534534 ZCCHC6Q5VYS8 1495 aaKnown RBP21.38■■□□□ 1.01
PPP6R3-226ENST00000534534 DCAF1Q9Y4B6 1507 aa21.3■■□□□ 1
PPP6R3-226ENST00000534534 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
PPP6R3-226ENST00000534534 ABCC9O60706 1549 aa21.06■□□□□ 0.96
PPP6R3-226ENST00000534534 NACADO15069 1562 aa20.99■□□□□ 0.95
PPP6R3-226ENST00000534534 RB1CC1Q8TDY2 1594 aa20.8■□□□□ 0.92
PPP6R3-226ENST00000534534 DCAF8L2P0C7V8 631 aa20.54■□□□□ 0.88
PPP6R3-226ENST00000534534 SCRIBQ14160 1630 aa20.31■□□□□ 0.84
PPP6R3-226ENST00000534534 UNC13AQ9UPW8 1703 aa20.28■□□□□ 0.84
PPP6R3-226ENST00000534534 SHROOM4Q9ULL8 1493 aa20.23■□□□□ 0.83
PPP6R3-226ENST00000534534 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.81
PPP6R3-226ENST00000534534 BAZ1AQ9NRL2 1556 aaPredicted RBP19.73■□□□□ 0.75
PPP6R3-226ENST00000534534 PABPN1Q86U42 306 aaKnown RBP eCLIP19.65■□□□□ 0.74
PPP6R3-226ENST00000534534 SMARCA4P51532 1647 aa19.63■□□□□ 0.73
PPP6R3-226ENST00000534534 CECR2Q9BXF3 1484 aa19.59■□□□□ 0.73
PPP6R3-226ENST00000534534 PEG3Q9GZU2 1588 aa19.56■□□□□ 0.72
PPP6R3-226ENST00000534534 RSF1Q96T23 1441 aaPredicted RBP19.55■□□□□ 0.72
PPP6R3-226ENST00000534534 MROH2BQ7Z745 1585 aa19.53■□□□□ 0.72
PPP6R3-226ENST00000534534 EIF4G1Q04637 1599 aaKnown RBP19.49■□□□□ 0.71
PPP6R3-226ENST00000534534 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
PPP6R3-226ENST00000534534 WIZO95785 1651 aa19.34■□□□□ 0.69
PPP6R3-226ENST00000534534 HMGXB3Q12766 1538 aa19.32■□□□□ 0.68
PPP6R3-226ENST00000534534 ATAD2BQ9ULI0 1458 aa19.32■□□□□ 0.68
PPP6R3-226ENST00000534534 TOP2AP11388 1531 aaKnown RBP19.32■□□□□ 0.68
PPP6R3-226ENST00000534534 NCAPD3P42695 1498 aa19.29■□□□□ 0.68
PPP6R3-226ENST00000534534 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
PPP6R3-226ENST00000534534 SUPT5HO00267 1087 aaKnown RBP19.2■□□□□ 0.66
PPP6R3-226ENST00000534534 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
PPP6R3-226ENST00000534534 CCDC88BA6NC98 1476 aa18.96■□□□□ 0.63
PPP6R3-226ENST00000534534 PRDM2Q13029 1718 aa18.81■□□□□ 0.6
PPP6R3-226ENST00000534534 CFTRP13569 1480 aa18.76■□□□□ 0.59
PPP6R3-226ENST00000534534 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
PPP6R3-226ENST00000534534 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
PPP6R3-226ENST00000534534 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
PPP6R3-226ENST00000534534 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
PPP6R3-226ENST00000534534 BIVM-ERCC5R4GMW8 1640 aa18.45■□□□□ 0.54
PPP6R3-226ENST00000534534 CHIC1Q5VXU3 224 aa18.45■□□□□ 0.54
PPP6R3-226ENST00000534534 FANCD2Q9BXW9 1451 aa18.45■□□□□ 0.54
PPP6R3-226ENST00000534534 ABCC8Q09428 1581 aa18.44■□□□□ 0.54
PPP6R3-226ENST00000534534 WRNQ14191 1432 aaPredicted RBP eCLIP18.42■□□□□ 0.54
PPP6R3-226ENST00000534534 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
PPP6R3-226ENST00000534534 CEP164Q9UPV0 1460 aa18.4■□□□□ 0.54
PPP6R3-226ENST00000534534 NESP48681 1621 aa18.4■□□□□ 0.54
PPP6R3-226ENST00000534534 DNMBPQ6XZF7 1577 aa18.35■□□□□ 0.53
PPP6R3-226ENST00000534534 KIF21AQ7Z4S6 1674 aa18.34■□□□□ 0.53
PPP6R3-226ENST00000534534 SYNJ1O43426 1573 aa18.33■□□□□ 0.52
PPP6R3-226ENST00000534534 CUX1P39880 1505 aa18.31■□□□□ 0.52
PPP6R3-226ENST00000534534 MRC2Q9UBG0 1479 aa18.27■□□□□ 0.52
PPP6R3-226ENST00000534534 TRIM41Q8WV44 630 aa18.26■□□□□ 0.51
PPP6R3-226ENST00000534534 WDR62O43379 1518 aa18.25■□□□□ 0.51
PPP6R3-226ENST00000534534 TOPBP1Q92547 1522 aa18.24■□□□□ 0.51
PPP6R3-226ENST00000534534 EEA1Q15075 1411 aa18.23■□□□□ 0.51
PPP6R3-226ENST00000534534 URB2Q14146 1524 aaKnown RBP18.21■□□□□ 0.51
PPP6R3-226ENST00000534534 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
PPP6R3-226ENST00000534534 WDR97A6NE52 1622 aa18.18■□□□□ 0.5
PPP6R3-226ENST00000534534 ERCC6Q03468 1493 aa18.16■□□□□ 0.5
PPP6R3-226ENST00000534534 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.49
PPP6R3-226ENST00000534534 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
PPP6R3-226ENST00000534534 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
PPP6R3-226ENST00000534534 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
PPP6R3-226ENST00000534534 IFT140Q96RY7 1462 aa18.05■□□□□ 0.48
PPP6R3-226ENST00000534534 KIF27Q86VH2 1401 aa18.02■□□□□ 0.48
PPP6R3-226ENST00000534534 SOGA1O94964 1423 aa18.01■□□□□ 0.47
PPP6R3-226ENST00000534534 ABCA5Q8WWZ7 1642 aa17.99■□□□□ 0.47
PPP6R3-226ENST00000534534 CUX2O14529 1486 aa17.99■□□□□ 0.47
PPP6R3-226ENST00000534534 KIF21BO75037 1637 aa17.95■□□□□ 0.46
PPP6R3-226ENST00000534534 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
PPP6R3-226ENST00000534534 CUL7Q14999 1698 aa17.92■□□□□ 0.46
PPP6R3-226ENST00000534534 RAD54L2Q9Y4B4 1467 aa17.91■□□□□ 0.46
PPP6R3-226ENST00000534534 CSRNP3Q8WYN3 585 aa17.87■□□□□ 0.45
PPP6R3-226ENST00000534534 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
PPP6R3-226ENST00000534534 RUSC2Q8N2Y8 1516 aa17.85■□□□□ 0.45
PPP6R3-226ENST00000534534 GAPVD1Q14C86 1478 aa17.85■□□□□ 0.45
PPP6R3-226ENST00000534534 PBRM1Q86U86 1689 aa17.85■□□□□ 0.45
PPP6R3-226ENST00000534534 GOLGA3Q08378 1498 aa17.81■□□□□ 0.44
PPP6R3-226ENST00000534534 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
PPP6R3-226ENST00000534534 IGF1RP08069 1367 aa17.81■□□□□ 0.44
PPP6R3-226ENST00000534534 EIF4G3O43432 1585 aaKnown RBP17.81■□□□□ 0.44
PPP6R3-226ENST00000534534 MAGI1Q96QZ7 1491 aaPredicted RBP17.76■□□□□ 0.43
PPP6R3-226ENST00000534534 ADAMTS12P58397 1594 aa17.75■□□□□ 0.43
PPP6R3-226ENST00000534534 RAPGEF2Q9Y4G8 1499 aa17.75■□□□□ 0.43
PPP6R3-226ENST00000534534 FHAD1B1AJZ9 1412 aa17.72■□□□□ 0.43
PPP6R3-226ENST00000534534 ZNF608Q9ULD9 1512 aaPredicted RBP17.72■□□□□ 0.43
PPP6R3-226ENST00000534534 CARMIL1Q5VZK9 1371 aa17.72■□□□□ 0.43
PPP6R3-226ENST00000534534 TDRD9Q8NDG6 1382 aaKnown RBP17.71■□□□□ 0.43
PPP6R3-226ENST00000534534 TNIKQ9UKE5 1360 aa17.7■□□□□ 0.42
PPP6R3-226ENST00000534534 AQRO60306 1485 aaKnown RBP eCLIP17.68■□□□□ 0.424e-7■■■■■ 26.8
PPP6R3-226ENST00000534534 FAM9AQ8IZU1 332 aaPredicted RBP17.64■□□□□ 0.41
PPP6R3-226ENST00000534534 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
PPP6R3-226ENST00000534534 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
PPP6R3-226ENST00000534534 CTTNBP2Q8WZ74 1663 aa17.62■□□□□ 0.41
PPP6R3-226ENST00000534534 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
PPP6R3-226ENST00000534534 EFCAB5A4FU69 1503 aa17.51■□□□□ 0.39
PPP6R3-226ENST00000534534 NUP160Q12769 1436 aa17.51■□□□□ 0.39
PPP6R3-226ENST00000534534 LOC105371045A0A1W2PR82 267 aa17.5■□□□□ 0.39
PPP6R3-226ENST00000534534 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
PPP6R3-226ENST00000534534 KIAA0586Q9BVV6 1533 aa17.48■□□□□ 0.39
PPP6R3-226ENST00000534534 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms