RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 NISCHQ9Y2I1 1504 aa33.74■■■□□ 2.99
SRRT-206ENST00000460194 ABCC9O60706 1549 aa30.42■■■□□ 2.46
SRRT-206ENST00000460194 CCDC180Q9P1Z9 1646 aa30.36■■■□□ 2.45
SRRT-206ENST00000460194 RB1CC1Q8TDY2 1594 aa28.91■■■□□ 2.22
SRRT-206ENST00000460194 DNAJC5BQ9UF47 199 aa28.8■■■□□ 2.2
SRRT-206ENST00000460194 NACADO15069 1562 aa28.71■■■□□ 2.19
SRRT-206ENST00000460194 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
SRRT-206ENST00000460194 MYO15BQ96JP2 1530 aa28.33■■■□□ 2.13
SRRT-206ENST00000460194 DCAF8L2P0C7V8 631 aa28.32■■■□□ 2.12
SRRT-206ENST00000460194 PABPN1Q86U42 306 aaKnown RBP eCLIP28.27■■■□□ 2.12
SRRT-206ENST00000460194 BICRAQ9NZM4 1560 aa28.2■■■□□ 2.1
SRRT-206ENST00000460194 ZCCHC6Q5VYS8 1495 aaKnown RBP27.93■■■□□ 2.06
SRRT-206ENST00000460194 DCAF1Q9Y4B6 1507 aa27.9■■■□□ 2.06
SRRT-206ENST00000460194 SHROOM4Q9ULL8 1493 aa27.72■■■□□ 2.03
SRRT-206ENST00000460194 SCRIBQ14160 1630 aa27.57■■■□□ 2
SRRT-206ENST00000460194 CC2D2AQ9P2K1 1620 aa27.53■■■□□ 2
SRRT-206ENST00000460194 EIF4G1Q04637 1599 aaKnown RBP27.44■■□□□ 1.98
SRRT-206ENST00000460194 CECR2Q9BXF3 1484 aa27.43■■□□□ 1.98
SRRT-206ENST00000460194 NCAPD3P42695 1498 aa26.53■■□□□ 1.84
SRRT-206ENST00000460194 DNAJC5Q9H3Z4 198 aa26.5■■□□□ 1.83
SRRT-206ENST00000460194 ATAD2BQ9ULI0 1458 aa26.41■■□□□ 1.82
SRRT-206ENST00000460194 SMARCA4P51532 1647 aa26.35■■□□□ 1.81
SRRT-206ENST00000460194 CUX2O14529 1486 aa26.3■■□□□ 1.8
SRRT-206ENST00000460194 HMGXB3Q12766 1538 aa26.3■■□□□ 1.8
SRRT-206ENST00000460194 SMARCA2P51531 1590 aa26.29■■□□□ 1.8
SRRT-206ENST00000460194 ERCC6Q03468 1493 aa26.19■■□□□ 1.78
SRRT-206ENST00000460194 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
SRRT-206ENST00000460194 BAZ1AQ9NRL2 1556 aaPredicted RBP26.16■■□□□ 1.78
SRRT-206ENST00000460194 NESP48681 1621 aa26.14■■□□□ 1.78
SRRT-206ENST00000460194 BAZ1BQ9UIG0 1483 aaKnown RBP26.07■■□□□ 1.76
SRRT-206ENST00000460194 MROH2BQ7Z745 1585 aa25.99■■□□□ 1.75
SRRT-206ENST00000460194 THOC2Q8NI27 1593 aaKnown RBP25.95■■□□□ 1.74
SRRT-206ENST00000460194 LAMC3Q9Y6N6 1575 aa25.93■■□□□ 1.74
SRRT-206ENST00000460194 KIF21AQ7Z4S6 1674 aa25.83■■□□□ 1.73
SRRT-206ENST00000460194 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
SRRT-206ENST00000460194 WIZO95785 1651 aa25.68■■□□□ 1.7
SRRT-206ENST00000460194 CADPSQ9ULU8 1353 aa25.67■■□□□ 1.7
SRRT-206ENST00000460194 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
SRRT-206ENST00000460194 WDR62O43379 1518 aa25.53■■□□□ 1.68
SRRT-206ENST00000460194 RSF1Q96T23 1441 aaPredicted RBP25.39■■□□□ 1.66
SRRT-206ENST00000460194 CFTRP13569 1480 aa25.38■■□□□ 1.65
SRRT-206ENST00000460194 CEP164Q9UPV0 1460 aa25.37■■□□□ 1.65
SRRT-206ENST00000460194 FANCD2Q9BXW9 1451 aa25.36■■□□□ 1.65
SRRT-206ENST00000460194 TOP2AP11388 1531 aaKnown RBP25.31■■□□□ 1.64
SRRT-206ENST00000460194 URB2Q14146 1524 aaKnown RBP25.22■■□□□ 1.63
SRRT-206ENST00000460194 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
SRRT-206ENST00000460194 TRIM41Q8WV44 630 aa25.11■■□□□ 1.61
SRRT-206ENST00000460194 CCDC88BA6NC98 1476 aa25.03■■□□□ 1.6
SRRT-206ENST00000460194 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
SRRT-206ENST00000460194 ZNF608Q9ULD9 1512 aaPredicted RBP24.92■■□□□ 1.58
SRRT-206ENST00000460194 IFT140Q96RY7 1462 aa24.89■■□□□ 1.58
SRRT-206ENST00000460194 TOPBP1Q92547 1522 aa24.89■■□□□ 1.57
SRRT-206ENST00000460194 RIMBP3CA6NJZ7 1639 aa24.8■■□□□ 1.56
SRRT-206ENST00000460194 RIMBP3BA6NNM3 1639 aa24.8■■□□□ 1.56
SRRT-206ENST00000460194 RIMBP3Q9UFD9 1639 aa24.8■■□□□ 1.56
SRRT-206ENST00000460194 ABCC8Q09428 1581 aa24.79■■□□□ 1.56
SRRT-206ENST00000460194 DNMBPQ6XZF7 1577 aa24.78■■□□□ 1.56
SRRT-206ENST00000460194 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
SRRT-206ENST00000460194 TARBP1Q13395 1621 aaKnown RBP24.74■■□□□ 1.55
SRRT-206ENST00000460194 ARHGEF11O15085 1522 aa24.69■■□□□ 1.54
SRRT-206ENST00000460194 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.533e-9■■■■■ 29.8
SRRT-206ENST00000460194 CHD1O14646 1710 aa24.64■■□□□ 1.53
SRRT-206ENST00000460194 POLA1P09884 1462 aaPredicted RBP24.63■■□□□ 1.53
SRRT-206ENST00000460194 RAD54L2Q9Y4B4 1467 aa24.53■■□□□ 1.52
SRRT-206ENST00000460194 SOGA1O94964 1423 aa24.46■■□□□ 1.51
SRRT-206ENST00000460194 ARAP1Q96P48 1450 aa24.45■■□□□ 1.5
SRRT-206ENST00000460194 TDRD9Q8NDG6 1382 aaKnown RBP24.44■■□□□ 1.5
SRRT-206ENST00000460194 WDR97A6NE52 1622 aa24.43■■□□□ 1.5
SRRT-206ENST00000460194 CYB5RLQ6IPT4 315 aa24.43■■□□□ 1.5
SRRT-206ENST00000460194 FGD5Q6ZNL6 1462 aa24.43■■□□□ 1.5
SRRT-206ENST00000460194 CUX1P39880 1505 aa24.42■■□□□ 1.5
SRRT-206ENST00000460194 SNAPC4Q5SXM2 1469 aa24.37■■□□□ 1.49
SRRT-206ENST00000460194 CLASP1Q7Z460 1538 aa24.36■■□□□ 1.49
SRRT-206ENST00000460194 FBLN2P98095 1184 aa24.36■■□□□ 1.49
SRRT-206ENST00000460194 MAGI1Q96QZ7 1491 aaPredicted RBP24.31■■□□□ 1.48
SRRT-206ENST00000460194 GRIN2BQ13224 1484 aa24.27■■□□□ 1.48
SRRT-206ENST00000460194 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
SRRT-206ENST00000460194 SYNJ2O15056 1496 aa24.24■■□□□ 1.47
SRRT-206ENST00000460194 PBRM1Q86U86 1689 aa24.23■■□□□ 1.47
SRRT-206ENST00000460194 CHMP7Q8WUX9 453 aaPredicted RBP24.21■■□□□ 1.47
SRRT-206ENST00000460194 ABCA5Q8WWZ7 1642 aa24.18■■□□□ 1.46
SRRT-206ENST00000460194 GAPVD1Q14C86 1478 aa24.18■■□□□ 1.46
SRRT-206ENST00000460194 ABCA10Q8WWZ4 1543 aa24.17■■□□□ 1.46
SRRT-206ENST00000460194 TRHP20396 242 aaPredicted RBP24.13■■□□□ 1.45
SRRT-206ENST00000460194 BIVM-ERCC5R4GMW8 1640 aa24.02■■□□□ 1.44
SRRT-206ENST00000460194 GRIN2AQ12879 1464 aa23.99■■□□□ 1.43
SRRT-206ENST00000460194 TOP2BQ02880 1626 aa23.99■■□□□ 1.43
SRRT-206ENST00000460194 ERCC6L2Q5T890 1561 aa23.98■■□□□ 1.43
SRRT-206ENST00000460194 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
SRRT-206ENST00000460194 ADAMTS12P58397 1594 aa23.97■■□□□ 1.43
SRRT-206ENST00000460194 WRNQ14191 1432 aaPredicted RBP eCLIP23.97■■□□□ 1.43
SRRT-206ENST00000460194 NUP160Q12769 1436 aa23.95■■□□□ 1.42
SRRT-206ENST00000460194 CEP170Q5SW79 1584 aa23.95■■□□□ 1.42
SRRT-206ENST00000460194 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
SRRT-206ENST00000460194 FHAD1B1AJZ9 1412 aa23.86■■□□□ 1.41
SRRT-206ENST00000460194 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
SRRT-206ENST00000460194 KIF13AQ9H1H9 1805 aa23.69■■□□□ 1.38
SRRT-206ENST00000460194 PRG4Q92954 1404 aaPredicted RBP23.67■■□□□ 1.38
SRRT-206ENST00000460194 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.38
SRRT-206ENST00000460194 JPH4Q96JJ6 628 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms