Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LIMS2Q7Z4I7 RP9P-202ENST00000450133 1212 ntBASIC26.23■■□□□ 1.79
LIMS2Q7Z4I7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LIMS2Q7Z4I7 MIR3960-201ENST00000583311 91 ntBASIC26.23■■□□□ 1.79
LIMS2Q7Z4I7 AC026202.3-201ENST00000600805 1127 ntBASIC26.23■■□□□ 1.79
LIMS2Q7Z4I7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LIMS2Q7Z4I7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.22■■□□□ 1.79
LIMS2Q7Z4I7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LIMS2Q7Z4I7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.21■■□□□ 1.79
LIMS2Q7Z4I7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.21■■□□□ 1.79
LIMS2Q7Z4I7 RAP2CP1-202ENST00000605179 643 ntBASIC26.21■■□□□ 1.79
LIMS2Q7Z4I7 AC142472.1-201ENST00000612013 1741 ntBASIC26.21■■□□□ 1.79
LIMS2Q7Z4I7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LIMS2Q7Z4I7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LIMS2Q7Z4I7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
LIMS2Q7Z4I7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
LIMS2Q7Z4I7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
LIMS2Q7Z4I7 AC009831.1-201ENST00000580420 1582 ntBASIC26.2■■□□□ 1.79
LIMS2Q7Z4I7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
LIMS2Q7Z4I7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
LIMS2Q7Z4I7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.2■■□□□ 1.78
LIMS2Q7Z4I7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
LIMS2Q7Z4I7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
LIMS2Q7Z4I7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
LIMS2Q7Z4I7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
LIMS2Q7Z4I7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
LIMS2Q7Z4I7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
LIMS2Q7Z4I7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.18■■□□□ 1.78
LIMS2Q7Z4I7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
LIMS2Q7Z4I7 AC093536.1-201ENST00000569153 554 ntBASIC26.18■■□□□ 1.78
LIMS2Q7Z4I7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
LIMS2Q7Z4I7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.17■■□□□ 1.78
LIMS2Q7Z4I7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LIMS2Q7Z4I7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.17■■□□□ 1.78
LIMS2Q7Z4I7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
LIMS2Q7Z4I7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LIMS2Q7Z4I7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
LIMS2Q7Z4I7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
LIMS2Q7Z4I7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LIMS2Q7Z4I7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
LIMS2Q7Z4I7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.16■■□□□ 1.78
LIMS2Q7Z4I7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LIMS2Q7Z4I7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.15■■□□□ 1.78
LIMS2Q7Z4I7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.15■■□□□ 1.78
LIMS2Q7Z4I7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LIMS2Q7Z4I7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.15■■□□□ 1.78
LIMS2Q7Z4I7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
LIMS2Q7Z4I7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
LIMS2Q7Z4I7 KRT18P60-201ENST00000312876 1297 ntBASIC26.14■■□□□ 1.78
LIMS2Q7Z4I7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
LIMS2Q7Z4I7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
LIMS2Q7Z4I7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.14■■□□□ 1.77
LIMS2Q7Z4I7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
LIMS2Q7Z4I7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
LIMS2Q7Z4I7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LIMS2Q7Z4I7 AP004609.3-201ENST00000610705 1884 ntBASIC26.13■■□□□ 1.77
LIMS2Q7Z4I7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
LIMS2Q7Z4I7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
LIMS2Q7Z4I7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
LIMS2Q7Z4I7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.13■■□□□ 1.77
LIMS2Q7Z4I7 AC133552.2-201ENST00000619106 1032 ntBASIC26.13■■□□□ 1.77
LIMS2Q7Z4I7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
LIMS2Q7Z4I7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.12■■□□□ 1.77
LIMS2Q7Z4I7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LIMS2Q7Z4I7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
LIMS2Q7Z4I7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.12■■□□□ 1.77
LIMS2Q7Z4I7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.12■■□□□ 1.77
LIMS2Q7Z4I7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.12■■□□□ 1.77
LIMS2Q7Z4I7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LIMS2Q7Z4I7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LIMS2Q7Z4I7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LIMS2Q7Z4I7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
LIMS2Q7Z4I7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
LIMS2Q7Z4I7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.1■■□□□ 1.77
LIMS2Q7Z4I7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LIMS2Q7Z4I7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
LIMS2Q7Z4I7 AL592293.1-201ENST00000502889 1188 ntBASIC26.09■■□□□ 1.77
LIMS2Q7Z4I7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LIMS2Q7Z4I7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.09■■□□□ 1.77
LIMS2Q7Z4I7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LIMS2Q7Z4I7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LIMS2Q7Z4I7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.76
LIMS2Q7Z4I7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.07■■□□□ 1.76
LIMS2Q7Z4I7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
LIMS2Q7Z4I7 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.07■■□□□ 1.76
LIMS2Q7Z4I7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
LIMS2Q7Z4I7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.06■■□□□ 1.76
LIMS2Q7Z4I7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LIMS2Q7Z4I7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
LIMS2Q7Z4I7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
LIMS2Q7Z4I7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
LIMS2Q7Z4I7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LIMS2Q7Z4I7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.04■■□□□ 1.76
LIMS2Q7Z4I7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.04■■□□□ 1.76
LIMS2Q7Z4I7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
LIMS2Q7Z4I7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.04■■□□□ 1.76
LIMS2Q7Z4I7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LIMS2Q7Z4I7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
LIMS2Q7Z4I7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LIMS2Q7Z4I7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms