Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00242Q5T6M2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00242Q5T6M2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00242Q5T6M2 AC010501.1-201ENST00000606270 1962 ntBASIC16.72■□□□□ 0.27
LINC00242Q5T6M2 DUX4L28-201ENST00000623687 678 ntBASIC16.72■□□□□ 0.27
LINC00242Q5T6M2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LINC00242Q5T6M2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00242Q5T6M2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LINC00242Q5T6M2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.72■□□□□ 0.27
LINC00242Q5T6M2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00242Q5T6M2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
LINC00242Q5T6M2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00242Q5T6M2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00242Q5T6M2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC00242Q5T6M2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00242Q5T6M2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00242Q5T6M2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC00242Q5T6M2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00242Q5T6M2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00242Q5T6M2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00242Q5T6M2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00242Q5T6M2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00242Q5T6M2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LINC00242Q5T6M2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00242Q5T6M2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00242Q5T6M2 AC142381.3-201ENST00000568208 1670 ntBASIC16.68■□□□□ 0.26
LINC00242Q5T6M2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00242Q5T6M2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00242Q5T6M2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
LINC00242Q5T6M2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00242Q5T6M2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
LINC00242Q5T6M2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC00242Q5T6M2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.67■□□□□ 0.26
LINC00242Q5T6M2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00242Q5T6M2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
LINC00242Q5T6M2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00242Q5T6M2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00242Q5T6M2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00242Q5T6M2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00242Q5T6M2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00242Q5T6M2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00242Q5T6M2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00242Q5T6M2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.66■□□□□ 0.26
LINC00242Q5T6M2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00242Q5T6M2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00242Q5T6M2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.65■□□□□ 0.26
LINC00242Q5T6M2 MIR3665-201ENST00000578708 105 ntBASIC16.65■□□□□ 0.26
LINC00242Q5T6M2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.65■□□□□ 0.26
LINC00242Q5T6M2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00242Q5T6M2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00242Q5T6M2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00242Q5T6M2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00242Q5T6M2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00242Q5T6M2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00242Q5T6M2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LINC00242Q5T6M2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC00242Q5T6M2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00242Q5T6M2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00242Q5T6M2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.63■□□□□ 0.25
LINC00242Q5T6M2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00242Q5T6M2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00242Q5T6M2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00242Q5T6M2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00242Q5T6M2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00242Q5T6M2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00242Q5T6M2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00242Q5T6M2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00242Q5T6M2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00242Q5T6M2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00242Q5T6M2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00242Q5T6M2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00242Q5T6M2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00242Q5T6M2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00242Q5T6M2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00242Q5T6M2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00242Q5T6M2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00242Q5T6M2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00242Q5T6M2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00242Q5T6M2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00242Q5T6M2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00242Q5T6M2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00242Q5T6M2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LINC00242Q5T6M2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00242Q5T6M2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00242Q5T6M2 AC022211.4-201ENST00000625094 2161 ntBASIC16.6■□□□□ 0.25
LINC00242Q5T6M2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00242Q5T6M2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00242Q5T6M2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00242Q5T6M2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00242Q5T6M2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00242Q5T6M2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LINC00242Q5T6M2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00242Q5T6M2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LINC00242Q5T6M2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00242Q5T6M2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00242Q5T6M2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.59■□□□□ 0.25
LINC00242Q5T6M2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.59■□□□□ 0.25
LINC00242Q5T6M2 AC138932.3-201ENST00000567634 1902 ntBASIC16.58■□□□□ 0.25
LINC00242Q5T6M2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.58■□□□□ 0.25
LINC00242Q5T6M2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms