Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHRFAM7AQ494W8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHRFAM7AQ494W8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRFAM7AQ494W8 LINC00273-201ENST00000539813 1452 ntBASIC21.24■□□□□ 0.99
CHRFAM7AQ494W8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRFAM7AQ494W8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHRFAM7AQ494W8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.23■□□□□ 0.99
CHRFAM7AQ494W8 AC008813.1-201ENST00000536597 885 ntBASIC21.23■□□□□ 0.99
CHRFAM7AQ494W8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.23■□□□□ 0.99
CHRFAM7AQ494W8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CHRFAM7AQ494W8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHRFAM7AQ494W8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CHRFAM7AQ494W8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRFAM7AQ494W8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRFAM7AQ494W8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRFAM7AQ494W8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRFAM7AQ494W8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRFAM7AQ494W8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRFAM7AQ494W8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHRFAM7AQ494W8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHRFAM7AQ494W8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.21■□□□□ 0.99
CHRFAM7AQ494W8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRFAM7AQ494W8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRFAM7AQ494W8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.2■□□□□ 0.98
CHRFAM7AQ494W8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRFAM7AQ494W8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRFAM7AQ494W8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.2■□□□□ 0.98
CHRFAM7AQ494W8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHRFAM7AQ494W8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRFAM7AQ494W8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CHRFAM7AQ494W8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRFAM7AQ494W8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CHRFAM7AQ494W8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.19■□□□□ 0.98
CHRFAM7AQ494W8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHRFAM7AQ494W8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHRFAM7AQ494W8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHRFAM7AQ494W8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.18■□□□□ 0.98
CHRFAM7AQ494W8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHRFAM7AQ494W8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.18■□□□□ 0.98
CHRFAM7AQ494W8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.18■□□□□ 0.98
CHRFAM7AQ494W8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHRFAM7AQ494W8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CHRFAM7AQ494W8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRFAM7AQ494W8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRFAM7AQ494W8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRFAM7AQ494W8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRFAM7AQ494W8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRFAM7AQ494W8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRFAM7AQ494W8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.17■□□□□ 0.98
CHRFAM7AQ494W8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.16■□□□□ 0.98
CHRFAM7AQ494W8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.16■□□□□ 0.98
CHRFAM7AQ494W8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.15■□□□□ 0.98
CHRFAM7AQ494W8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRFAM7AQ494W8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHRFAM7AQ494W8 AC091060.1-201ENST00000623524 1766 ntBASIC21.15■□□□□ 0.98
CHRFAM7AQ494W8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHRFAM7AQ494W8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.14■□□□□ 0.97
CHRFAM7AQ494W8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRFAM7AQ494W8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRFAM7AQ494W8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRFAM7AQ494W8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.14■□□□□ 0.97
CHRFAM7AQ494W8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.13■□□□□ 0.97
CHRFAM7AQ494W8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.13■□□□□ 0.97
CHRFAM7AQ494W8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.13■□□□□ 0.97
CHRFAM7AQ494W8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRFAM7AQ494W8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRFAM7AQ494W8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHRFAM7AQ494W8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.12■□□□□ 0.97
CHRFAM7AQ494W8 U85056.1-201ENST00000616429 682 ntBASIC21.12■□□□□ 0.97
CHRFAM7AQ494W8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.12■□□□□ 0.97
CHRFAM7AQ494W8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRFAM7AQ494W8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRFAM7AQ494W8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHRFAM7AQ494W8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CHRFAM7AQ494W8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CHRFAM7AQ494W8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CHRFAM7AQ494W8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.1■□□□□ 0.97
CHRFAM7AQ494W8 TSPY13P-201ENST00000338964 914 ntBASIC21.1■□□□□ 0.97
CHRFAM7AQ494W8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.1■□□□□ 0.97
CHRFAM7AQ494W8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRFAM7AQ494W8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CHRFAM7AQ494W8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRFAM7AQ494W8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRFAM7AQ494W8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRFAM7AQ494W8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRFAM7AQ494W8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRFAM7AQ494W8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRFAM7AQ494W8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.09■□□□□ 0.97
CHRFAM7AQ494W8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.08■□□□□ 0.97
CHRFAM7AQ494W8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.08■□□□□ 0.97
CHRFAM7AQ494W8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHRFAM7AQ494W8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHRFAM7AQ494W8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRFAM7AQ494W8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRFAM7AQ494W8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms