Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21■□□□□ 0.95
EFNB3Q15768 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
EFNB3Q15768 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21■□□□□ 0.95
EFNB3Q15768 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EFNB3Q15768 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EFNB3Q15768 AL033527.3-201ENST00000566366 1196 ntBASIC20.99■□□□□ 0.95
EFNB3Q15768 AC129492.7-201ENST00000622992 756 ntBASIC20.99■□□□□ 0.95
EFNB3Q15768 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.98■□□□□ 0.95
EFNB3Q15768 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFNB3Q15768 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
EFNB3Q15768 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFNB3Q15768 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
EFNB3Q15768 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFNB3Q15768 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EFNB3Q15768 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.97■□□□□ 0.95
EFNB3Q15768 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.97■□□□□ 0.95
EFNB3Q15768 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFNB3Q15768 BX255925.1-201ENST00000566954 1854 ntBASIC20.96■□□□□ 0.95
EFNB3Q15768 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EFNB3Q15768 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFNB3Q15768 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EFNB3Q15768 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.96■□□□□ 0.95
EFNB3Q15768 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFNB3Q15768 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
EFNB3Q15768 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
EFNB3Q15768 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
EFNB3Q15768 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFNB3Q15768 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFNB3Q15768 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
EFNB3Q15768 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EFNB3Q15768 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
EFNB3Q15768 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
EFNB3Q15768 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFNB3Q15768 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
EFNB3Q15768 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFNB3Q15768 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFNB3Q15768 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EFNB3Q15768 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.94■□□□□ 0.94
EFNB3Q15768 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
EFNB3Q15768 AL449106.1-201ENST00000608517 1980 ntBASIC20.94■□□□□ 0.94
EFNB3Q15768 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
EFNB3Q15768 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
EFNB3Q15768 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
EFNB3Q15768 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.94■□□□□ 0.94
EFNB3Q15768 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
EFNB3Q15768 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EFNB3Q15768 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFNB3Q15768 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.93■□□□□ 0.94
EFNB3Q15768 AC142086.6-201ENST00000621154 1765 ntBASIC20.93■□□□□ 0.94
EFNB3Q15768 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.93■□□□□ 0.94
EFNB3Q15768 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EFNB3Q15768 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EFNB3Q15768 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
EFNB3Q15768 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFNB3Q15768 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFNB3Q15768 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFNB3Q15768 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EFNB3Q15768 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFNB3Q15768 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EFNB3Q15768 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.92■□□□□ 0.94
EFNB3Q15768 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
EFNB3Q15768 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.92■□□□□ 0.94
EFNB3Q15768 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
EFNB3Q15768 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EFNB3Q15768 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
EFNB3Q15768 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EFNB3Q15768 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.9■□□□□ 0.94
EFNB3Q15768 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EFNB3Q15768 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EFNB3Q15768 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.9■□□□□ 0.94
EFNB3Q15768 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EFNB3Q15768 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
EFNB3Q15768 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EFNB3Q15768 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
EFNB3Q15768 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EFNB3Q15768 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
EFNB3Q15768 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.89■□□□□ 0.93
EFNB3Q15768 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
EFNB3Q15768 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EFNB3Q15768 DUX4L9-201ENST00000449051 1259 ntBASIC20.88■□□□□ 0.93
EFNB3Q15768 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.88■□□□□ 0.93
EFNB3Q15768 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EFNB3Q15768 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFNB3Q15768 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
EFNB3Q15768 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.87■□□□□ 0.93
EFNB3Q15768 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EFNB3Q15768 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.87■□□□□ 0.93
EFNB3Q15768 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFNB3Q15768 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFNB3Q15768 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.86■□□□□ 0.93
EFNB3Q15768 DUX4L18-201ENST00000553347 1267 ntBASIC20.86■□□□□ 0.93
EFNB3Q15768 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EFNB3Q15768 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.86■□□□□ 0.93
EFNB3Q15768 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
EFNB3Q15768 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFNB3Q15768 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
EFNB3Q15768 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EFNB3Q15768 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EFNB3Q15768 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
EFNB3Q15768 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms