Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CKS1BP61024 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CKS1BP61024 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CKS1BP61024 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKS1BP61024 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CKS1BP61024 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CKS1BP61024 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC16.89■□□□□ 0.29
CKS1BP61024 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKS1BP61024 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKS1BP61024 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
CKS1BP61024 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CKS1BP61024 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKS1BP61024 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CKS1BP61024 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CKS1BP61024 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKS1BP61024 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.88■□□□□ 0.29
CKS1BP61024 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CKS1BP61024 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CKS1BP61024 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC16.88■□□□□ 0.29
CKS1BP61024 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.87■□□□□ 0.29
CKS1BP61024 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CKS1BP61024 AL024507.2-201ENST00000606070 2574 ntBASIC16.86■□□□□ 0.29
CKS1BP61024 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CKS1BP61024 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CKS1BP61024 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CKS1BP61024 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.86■□□□□ 0.29
CKS1BP61024 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CKS1BP61024 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CKS1BP61024 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CKS1BP61024 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CKS1BP61024 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 AP002414.2-202ENST00000590929 1450 ntBASIC16.85■□□□□ 0.29
CKS1BP61024 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CKS1BP61024 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CKS1BP61024 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CKS1BP61024 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CKS1BP61024 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CKS1BP61024 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CKS1BP61024 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CKS1BP61024 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.84■□□□□ 0.29
CKS1BP61024 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CKS1BP61024 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC16.84■□□□□ 0.29
CKS1BP61024 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CKS1BP61024 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CKS1BP61024 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CKS1BP61024 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CKS1BP61024 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CKS1BP61024 RPS2-209ENST00000529806 993 ntTSL 3 BASIC16.83■□□□□ 0.28
CKS1BP61024 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CKS1BP61024 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKS1BP61024 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC16.82■□□□□ 0.28
CKS1BP61024 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKS1BP61024 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC16.82■□□□□ 0.28
CKS1BP61024 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.82■□□□□ 0.28
CKS1BP61024 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CKS1BP61024 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC16.82■□□□□ 0.28
CKS1BP61024 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS1BP61024 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS1BP61024 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS1BP61024 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC16.81■□□□□ 0.28
CKS1BP61024 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS1BP61024 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CKS1BP61024 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CKS1BP61024 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKS1BP61024 AC097358.2-201ENST00000607541 1159 ntBASIC16.8■□□□□ 0.28
CKS1BP61024 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CKS1BP61024 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.8■□□□□ 0.28
CKS1BP61024 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKS1BP61024 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CKS1BP61024 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CKS1BP61024 MEST-211ENST00000437945 1455 ntTSL 5 BASIC16.79■□□□□ 0.28
CKS1BP61024 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC16.79■□□□□ 0.28
CKS1BP61024 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.79■□□□□ 0.28
CKS1BP61024 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CKS1BP61024 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKS1BP61024 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CKS1BP61024 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKS1BP61024 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC16.78■□□□□ 0.28
CKS1BP61024 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKS1BP61024 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CKS1BP61024 CAHM-201ENST00000604200 896 ntBASIC16.78■□□□□ 0.28
CKS1BP61024 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.78■□□□□ 0.28
CKS1BP61024 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms