Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
COL15A1P39059 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
COL15A1P39059 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.61■■■□□ 2.65
COL15A1P39059 AC009299.2-201ENST00000482477 511 ntBASIC31.61■■■□□ 2.65
COL15A1P39059 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.61■■■□□ 2.65
COL15A1P39059 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL15A1P39059 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL15A1P39059 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
COL15A1P39059 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL15A1P39059 AC103834.1-201ENST00000520383 144 ntBASIC31.6■■■□□ 2.65
COL15A1P39059 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.6■■■□□ 2.65
COL15A1P39059 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL15A1P39059 PVT1_1.1-201ENST00000615125 194 ntBASIC31.6■■■□□ 2.65
COL15A1P39059 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL15A1P39059 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.6■■■□□ 2.65
COL15A1P39059 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
COL15A1P39059 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.59■■■□□ 2.65
COL15A1P39059 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.58■■■□□ 2.65
COL15A1P39059 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
COL15A1P39059 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.58■■■□□ 2.65
COL15A1P39059 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
COL15A1P39059 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
COL15A1P39059 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
COL15A1P39059 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.56■■■□□ 2.64
COL15A1P39059 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
COL15A1P39059 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.56■■■□□ 2.64
COL15A1P39059 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
COL15A1P39059 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.56■■■□□ 2.64
COL15A1P39059 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
COL15A1P39059 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
COL15A1P39059 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
COL15A1P39059 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
COL15A1P39059 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
COL15A1P39059 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
COL15A1P39059 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
COL15A1P39059 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
COL15A1P39059 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
COL15A1P39059 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
COL15A1P39059 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
COL15A1P39059 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
COL15A1P39059 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.54■■■□□ 2.64
COL15A1P39059 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
COL15A1P39059 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.53■■■□□ 2.64
COL15A1P39059 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.53■■■□□ 2.64
COL15A1P39059 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
COL15A1P39059 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.52■■■□□ 2.64
COL15A1P39059 YBX1P4-201ENST00000392794 808 ntBASIC31.52■■■□□ 2.64
COL15A1P39059 AC018755.3-202ENST00000596210 929 ntBASIC31.52■■■□□ 2.64
COL15A1P39059 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.52■■■□□ 2.64
COL15A1P39059 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
COL15A1P39059 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
COL15A1P39059 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
COL15A1P39059 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.51■■■□□ 2.63
COL15A1P39059 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
COL15A1P39059 AL359504.2-201ENST00000605506 1601 ntBASIC31.5■■■□□ 2.63
COL15A1P39059 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
COL15A1P39059 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
COL15A1P39059 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
COL15A1P39059 MIR4508-201ENST00000584178 70 ntBASIC31.49■■■□□ 2.63
COL15A1P39059 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
COL15A1P39059 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
COL15A1P39059 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.48■■■□□ 2.63
COL15A1P39059 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.48■■■□□ 2.63
COL15A1P39059 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.48■■■□□ 2.63
COL15A1P39059 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
COL15A1P39059 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
COL15A1P39059 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.48■■■□□ 2.63
COL15A1P39059 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.47■■■□□ 2.63
COL15A1P39059 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
COL15A1P39059 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
COL15A1P39059 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
COL15A1P39059 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
COL15A1P39059 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.45■■■□□ 2.63
COL15A1P39059 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
COL15A1P39059 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.44■■■□□ 2.62
COL15A1P39059 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
COL15A1P39059 DRD5P2-201ENST00000421395 2012 ntBASIC31.44■■■□□ 2.62
COL15A1P39059 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
COL15A1P39059 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
COL15A1P39059 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
COL15A1P39059 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
COL15A1P39059 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
COL15A1P39059 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.43■■■□□ 2.62
COL15A1P39059 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
COL15A1P39059 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
COL15A1P39059 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
COL15A1P39059 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
COL15A1P39059 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
COL15A1P39059 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
COL15A1P39059 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
COL15A1P39059 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
COL15A1P39059 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
COL15A1P39059 AL592295.1-201ENST00000400984 884 ntBASIC31.41■■■□□ 2.62
COL15A1P39059 GUSBP5-201ENST00000418136 578 ntBASIC31.41■■■□□ 2.62
COL15A1P39059 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
COL15A1P39059 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
COL15A1P39059 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.4■■■□□ 2.62
COL15A1P39059 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
COL15A1P39059 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
COL15A1P39059 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms