Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKN1AP38936 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CDKN1AP38936 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.97■□□□□ 0.95
CDKN1AP38936 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CDKN1AP38936 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKN1AP38936 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDKN1AP38936 AC139795.1-202ENST00000500444 432 ntBASIC20.97■□□□□ 0.95
CDKN1AP38936 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKN1AP38936 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDKN1AP38936 AL359504.2-201ENST00000605506 1601 ntBASIC20.96■□□□□ 0.95
CDKN1AP38936 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKN1AP38936 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKN1AP38936 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKN1AP38936 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.96■□□□□ 0.95
CDKN1AP38936 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.96■□□□□ 0.95
CDKN1AP38936 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN1AP38936 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN1AP38936 AL451085.2-201ENST00000605085 799 ntBASIC20.95■□□□□ 0.94
CDKN1AP38936 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN1AP38936 MIR6765-201ENST00000614092 87 ntBASIC20.95■□□□□ 0.94
CDKN1AP38936 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN1AP38936 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN1AP38936 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN1AP38936 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN1AP38936 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKN1AP38936 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CDKN1AP38936 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN1AP38936 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.94■□□□□ 0.94
CDKN1AP38936 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKN1AP38936 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN1AP38936 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN1AP38936 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN1AP38936 AC018755.3-202ENST00000596210 929 ntBASIC20.93■□□□□ 0.94
CDKN1AP38936 AL035685.1-201ENST00000636663 812 ntBASIC20.93■□□□□ 0.94
CDKN1AP38936 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CDKN1AP38936 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN1AP38936 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN1AP38936 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.92■□□□□ 0.94
CDKN1AP38936 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.92■□□□□ 0.94
CDKN1AP38936 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKN1AP38936 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKN1AP38936 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN1AP38936 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKN1AP38936 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.91■□□□□ 0.94
CDKN1AP38936 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKN1AP38936 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKN1AP38936 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.91■□□□□ 0.94
CDKN1AP38936 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKN1AP38936 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKN1AP38936 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKN1AP38936 WHAMMP3-201ENST00000611636 1609 ntBASIC20.91■□□□□ 0.94
CDKN1AP38936 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CDKN1AP38936 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.9■□□□□ 0.94
CDKN1AP38936 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.9■□□□□ 0.94
CDKN1AP38936 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.9■□□□□ 0.94
CDKN1AP38936 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKN1AP38936 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CDKN1AP38936 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.89■□□□□ 0.93
CDKN1AP38936 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDKN1AP38936 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.89■□□□□ 0.93
CDKN1AP38936 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CDKN1AP38936 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKN1AP38936 AC074183.2-201ENST00000623112 922 ntBASIC20.89■□□□□ 0.93
CDKN1AP38936 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.89■□□□□ 0.93
CDKN1AP38936 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN1AP38936 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.88■□□□□ 0.93
CDKN1AP38936 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN1AP38936 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN1AP38936 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN1AP38936 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.86■□□□□ 0.93
CDKN1AP38936 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CDKN1AP38936 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN1AP38936 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN1AP38936 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.86■□□□□ 0.93
CDKN1AP38936 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN1AP38936 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN1AP38936 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.86■□□□□ 0.93
CDKN1AP38936 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN1AP38936 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDKN1AP38936 YBX1P4-201ENST00000392794 808 ntBASIC20.85■□□□□ 0.93
CDKN1AP38936 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.85■□□□□ 0.93
CDKN1AP38936 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.85■□□□□ 0.93
CDKN1AP38936 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDKN1AP38936 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.85■□□□□ 0.93
CDKN1AP38936 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDKN1AP38936 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.84■□□□□ 0.93
CDKN1AP38936 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.84■□□□□ 0.93
CDKN1AP38936 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKN1AP38936 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDKN1AP38936 PVT1_1.1-201ENST00000615125 194 ntBASIC20.84■□□□□ 0.93
CDKN1AP38936 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDKN1AP38936 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKN1AP38936 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKN1AP38936 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.83■□□□□ 0.93
CDKN1AP38936 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.83■□□□□ 0.93
CDKN1AP38936 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.83■□□□□ 0.92
CDKN1AP38936 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKN1AP38936 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDKN1AP38936 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.82■□□□□ 0.92
CDKN1AP38936 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms