Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.84■■□□□ 1.41
CDH3P22223 WHAMMP3-201ENST00000611636 1609 ntBASIC23.84■■□□□ 1.41
CDH3P22223 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CDH3P22223 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CDH3P22223 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDH3P22223 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.84■■□□□ 1.41
CDH3P22223 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH3P22223 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH3P22223 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.83■■□□□ 1.41
CDH3P22223 LINC01003-201ENST00000564834 1764 ntBASIC23.83■■□□□ 1.4
CDH3P22223 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDH3P22223 SMPD5-203ENST00000639008 1464 ntBASIC23.82■■□□□ 1.4
CDH3P22223 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.82■■□□□ 1.4
CDH3P22223 NTF6A-201ENST00000591175 560 ntBASIC23.82■■□□□ 1.4
CDH3P22223 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDH3P22223 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDH3P22223 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CDH3P22223 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDH3P22223 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CDH3P22223 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
CDH3P22223 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDH3P22223 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.8■■□□□ 1.4
CDH3P22223 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.8■■□□□ 1.4
CDH3P22223 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH3P22223 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH3P22223 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH3P22223 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDH3P22223 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.8■■□□□ 1.4
CDH3P22223 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.8■■□□□ 1.4
CDH3P22223 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.8■■□□□ 1.4
CDH3P22223 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH3P22223 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDH3P22223 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.79■■□□□ 1.4
CDH3P22223 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.79■■□□□ 1.4
CDH3P22223 AC007029.1-201ENST00000604183 313 ntBASIC23.79■■□□□ 1.4
CDH3P22223 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDH3P22223 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDH3P22223 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CDH3P22223 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.78■■□□□ 1.4
CDH3P22223 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH3P22223 U85056.1-201ENST00000616429 682 ntBASIC23.77■■□□□ 1.4
CDH3P22223 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH3P22223 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH3P22223 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.76■■□□□ 1.39
CDH3P22223 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CDH3P22223 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.76■■□□□ 1.39
CDH3P22223 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH3P22223 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CDH3P22223 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDH3P22223 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CDH3P22223 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH3P22223 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH3P22223 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH3P22223 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDH3P22223 AC025884.2-201ENST00000553429 711 ntBASIC23.75■■□□□ 1.39
CDH3P22223 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CDH3P22223 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDH3P22223 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.74■■□□□ 1.39
CDH3P22223 BX255925.1-201ENST00000566954 1854 ntBASIC23.74■■□□□ 1.39
CDH3P22223 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDH3P22223 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.74■■□□□ 1.39
CDH3P22223 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CDH3P22223 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.73■■□□□ 1.39
CDH3P22223 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.73■■□□□ 1.39
CDH3P22223 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CDH3P22223 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDH3P22223 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDH3P22223 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDH3P22223 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH3P22223 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CDH3P22223 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.72■■□□□ 1.39
CDH3P22223 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDH3P22223 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.72■■□□□ 1.39
CDH3P22223 AL121749.1-202ENST00000609313 2153 ntBASIC23.72■■□□□ 1.39
CDH3P22223 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH3P22223 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.72■■□□□ 1.39
CDH3P22223 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDH3P22223 AL359504.2-201ENST00000605506 1601 ntBASIC23.71■■□□□ 1.39
CDH3P22223 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDH3P22223 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDH3P22223 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDH3P22223 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH3P22223 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CDH3P22223 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDH3P22223 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDH3P22223 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.7■■□□□ 1.38
CDH3P22223 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDH3P22223 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CDH3P22223 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CDH3P22223 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CDH3P22223 RP9P-202ENST00000450133 1212 ntBASIC23.69■■□□□ 1.38
CDH3P22223 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.69■■□□□ 1.38
CDH3P22223 MIR3960-201ENST00000583311 91 ntBASIC23.69■■□□□ 1.38
CDH3P22223 AC012354.3-201ENST00000623734 483 ntBASIC23.69■■□□□ 1.38
CDH3P22223 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDH3P22223 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDH3P22223 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDH3P22223 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDH3P22223 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDH3P22223 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms