Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DHFRP00374 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DHFRP00374 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DHFRP00374 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DHFRP00374 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DHFRP00374 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
DHFRP00374 AC018358.1-201ENST00000631079 1402 ntBASIC21.04■□□□□ 0.96
DHFRP00374 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DHFRP00374 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
DHFRP00374 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DHFRP00374 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DHFRP00374 LINC00543-201ENST00000567234 1845 ntBASIC21.04■□□□□ 0.96
DHFRP00374 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DHFRP00374 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
DHFRP00374 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DHFRP00374 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DHFRP00374 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DHFRP00374 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DHFRP00374 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DHFRP00374 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DHFRP00374 AC127502.1-201ENST00000399971 1502 ntBASIC21.03■□□□□ 0.96
DHFRP00374 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.02■□□□□ 0.96
DHFRP00374 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.02■□□□□ 0.96
DHFRP00374 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DHFRP00374 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
DHFRP00374 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.02■□□□□ 0.96
DHFRP00374 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DHFRP00374 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DHFRP00374 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DHFRP00374 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DHFRP00374 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
DHFRP00374 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DHFRP00374 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DHFRP00374 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
DHFRP00374 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DHFRP00374 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DHFRP00374 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DHFRP00374 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DHFRP00374 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DHFRP00374 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.99■□□□□ 0.95
DHFRP00374 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DHFRP00374 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DHFRP00374 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
DHFRP00374 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.99■□□□□ 0.95
DHFRP00374 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHFRP00374 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
DHFRP00374 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DHFRP00374 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.98■□□□□ 0.95
DHFRP00374 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.98■□□□□ 0.95
DHFRP00374 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.98■□□□□ 0.95
DHFRP00374 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
DHFRP00374 AL139125.2-201ENST00000623134 1869 ntBASIC20.98■□□□□ 0.95
DHFRP00374 AC079834.2-201ENST00000609776 1949 ntBASIC20.98■□□□□ 0.95
DHFRP00374 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHFRP00374 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
DHFRP00374 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHFRP00374 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHFRP00374 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHFRP00374 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.97■□□□□ 0.95
DHFRP00374 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHFRP00374 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DHFRP00374 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DHFRP00374 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
DHFRP00374 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
DHFRP00374 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.96■□□□□ 0.95
DHFRP00374 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DHFRP00374 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DHFRP00374 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DHFRP00374 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
DHFRP00374 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.95■□□□□ 0.94
DHFRP00374 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DHFRP00374 AP004609.3-201ENST00000610705 1884 ntBASIC20.94■□□□□ 0.94
DHFRP00374 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DHFRP00374 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
DHFRP00374 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DHFRP00374 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
DHFRP00374 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
DHFRP00374 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DHFRP00374 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.93■□□□□ 0.94
DHFRP00374 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHFRP00374 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHFRP00374 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
DHFRP00374 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.93■□□□□ 0.94
DHFRP00374 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
DHFRP00374 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.92■□□□□ 0.94
DHFRP00374 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DHFRP00374 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
DHFRP00374 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DHFRP00374 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.92■□□□□ 0.94
DHFRP00374 AC097358.2-201ENST00000607541 1159 ntBASIC20.92■□□□□ 0.94
DHFRP00374 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DHFRP00374 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
DHFRP00374 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
DHFRP00374 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DHFRP00374 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DHFRP00374 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DHFRP00374 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.91■□□□□ 0.94
DHFRP00374 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.91■□□□□ 0.94
DHFRP00374 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
DHFRP00374 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms