Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3DO95716 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3DO95716 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RAB3DO95716 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3DO95716 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB3DO95716 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAB3DO95716 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3DO95716 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3DO95716 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3DO95716 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3DO95716 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
RAB3DO95716 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3DO95716 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.7■□□□□ 0.91
RAB3DO95716 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RAB3DO95716 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB3DO95716 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3DO95716 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB3DO95716 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RAB3DO95716 CAHM-201ENST00000604200 896 ntBASIC20.7■□□□□ 0.9
RAB3DO95716 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3DO95716 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3DO95716 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3DO95716 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3DO95716 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB3DO95716 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3DO95716 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3DO95716 AC010501.1-201ENST00000606270 1962 ntBASIC20.69■□□□□ 0.9
RAB3DO95716 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.69■□□□□ 0.9
RAB3DO95716 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB3DO95716 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
RAB3DO95716 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3DO95716 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RAB3DO95716 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3DO95716 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RAB3DO95716 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3DO95716 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3DO95716 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB3DO95716 LINC00273-201ENST00000539813 1452 ntBASIC20.68■□□□□ 0.9
RAB3DO95716 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3DO95716 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3DO95716 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3DO95716 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3DO95716 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB3DO95716 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB3DO95716 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3DO95716 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3DO95716 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3DO95716 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RAB3DO95716 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3DO95716 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3DO95716 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3DO95716 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3DO95716 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3DO95716 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3DO95716 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.65■□□□□ 0.9
RAB3DO95716 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3DO95716 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3DO95716 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.65■□□□□ 0.9
RAB3DO95716 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB3DO95716 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3DO95716 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB3DO95716 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB3DO95716 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.64■□□□□ 0.9
RAB3DO95716 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB3DO95716 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RAB3DO95716 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RAB3DO95716 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3DO95716 AL139125.2-201ENST00000623134 1869 ntBASIC20.64■□□□□ 0.89
RAB3DO95716 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB3DO95716 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3DO95716 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3DO95716 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB3DO95716 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3DO95716 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3DO95716 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3DO95716 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
RAB3DO95716 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3DO95716 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3DO95716 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3DO95716 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3DO95716 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.62■□□□□ 0.89
RAB3DO95716 MIR762-201ENST00000390236 83 ntBASIC20.62■□□□□ 0.89
RAB3DO95716 WHAMMP3-201ENST00000611636 1609 ntBASIC20.62■□□□□ 0.89
RAB3DO95716 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3DO95716 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.62■□□□□ 0.89
RAB3DO95716 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3DO95716 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3DO95716 AC138932.3-201ENST00000567634 1902 ntBASIC20.62■□□□□ 0.89
RAB3DO95716 AC022211.4-201ENST00000625094 2161 ntBASIC20.62■□□□□ 0.89
RAB3DO95716 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB3DO95716 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.61■□□□□ 0.89
RAB3DO95716 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAB3DO95716 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB3DO95716 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.6■□□□□ 0.89
RAB3DO95716 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RAB3DO95716 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB3DO95716 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB3DO95716 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB3DO95716 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB3DO95716 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms