Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 AL359504.2-201ENST00000605506 1601 ntBASIC21.94■■□□□ 1.1
CCL21O00585 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.94■■□□□ 1.1
CCL21O00585 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.93■■□□□ 1.1
CCL21O00585 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCL21O00585 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCL21O00585 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.93■■□□□ 1.1
CCL21O00585 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.92■■□□□ 1.1
CCL21O00585 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CCL21O00585 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCL21O00585 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CCL21O00585 AC019069.1-201ENST00000610008 1333 ntBASIC21.92■■□□□ 1.1
CCL21O00585 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.92■■□□□ 1.1
CCL21O00585 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCL21O00585 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCL21O00585 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.92■■□□□ 1.1
CCL21O00585 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCL21O00585 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCL21O00585 AL031848.2-201ENST00000607670 837 ntBASIC21.92■■□□□ 1.1
CCL21O00585 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.92■■□□□ 1.1
CCL21O00585 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CCL21O00585 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCL21O00585 AC103724.3-201ENST00000564481 992 ntBASIC21.91■■□□□ 1.1
CCL21O00585 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCL21O00585 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCL21O00585 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCL21O00585 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCL21O00585 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCL21O00585 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.89■■□□□ 1.09
CCL21O00585 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.89■■□□□ 1.09
CCL21O00585 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCL21O00585 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCL21O00585 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCL21O00585 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CCL21O00585 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.88■■□□□ 1.09
CCL21O00585 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.88■■□□□ 1.09
CCL21O00585 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCL21O00585 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.88■■□□□ 1.09
CCL21O00585 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCL21O00585 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.88■■□□□ 1.09
CCL21O00585 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCL21O00585 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCL21O00585 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCL21O00585 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
CCL21O00585 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCL21O00585 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCL21O00585 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCL21O00585 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CCL21O00585 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCL21O00585 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCL21O00585 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCL21O00585 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCL21O00585 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CCL21O00585 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCL21O00585 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCL21O00585 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.85■■□□□ 1.09
CCL21O00585 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.84■■□□□ 1.09
CCL21O00585 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCL21O00585 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCL21O00585 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCL21O00585 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CCL21O00585 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCL21O00585 AL356441.2-201ENST00000443009 864 ntBASIC21.83■■□□□ 1.09
CCL21O00585 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.83■■□□□ 1.09
CCL21O00585 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CCL21O00585 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.82■■□□□ 1.08
CCL21O00585 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.82■■□□□ 1.08
CCL21O00585 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CCL21O00585 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCL21O00585 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCL21O00585 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.81■■□□□ 1.08
CCL21O00585 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.81■■□□□ 1.08
CCL21O00585 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCL21O00585 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCL21O00585 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCL21O00585 WHAMMP3-201ENST00000611636 1609 ntBASIC21.8■■□□□ 1.08
CCL21O00585 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.8■■□□□ 1.08
CCL21O00585 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCL21O00585 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCL21O00585 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.8■■□□□ 1.08
CCL21O00585 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCL21O00585 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.8■■□□□ 1.08
CCL21O00585 AC239859.2-201ENST00000444165 318 ntBASIC21.8■■□□□ 1.08
CCL21O00585 AC019171.1-201ENST00000601251 1056 ntBASIC21.8■■□□□ 1.08
CCL21O00585 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCL21O00585 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCL21O00585 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.8■■□□□ 1.08
CCL21O00585 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCL21O00585 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.79■■□□□ 1.08
CCL21O00585 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCL21O00585 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCL21O00585 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCL21O00585 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCL21O00585 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCL21O00585 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.78■■□□□ 1.08
CCL21O00585 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.78■■□□□ 1.08
CCL21O00585 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCL21O00585 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCL21O00585 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCL21O00585 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.77■■□□□ 1.08
CCL21O00585 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms