Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
LOC102724428A0A0B4J2F2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
LOC102724428A0A0B4J2F2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
LOC102724428A0A0B4J2F2 AL359504.2-201ENST00000605506 1601 ntBASIC31.92■■■□□ 2.7
LOC102724428A0A0B4J2F2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.91■■■□□ 2.7
LOC102724428A0A0B4J2F2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
LOC102724428A0A0B4J2F2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
LOC102724428A0A0B4J2F2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.9■■■□□ 2.7
LOC102724428A0A0B4J2F2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.9■■■□□ 2.7
LOC102724428A0A0B4J2F2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.89■■■□□ 2.7
LOC102724428A0A0B4J2F2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
LOC102724428A0A0B4J2F2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.89■■■□□ 2.7
LOC102724428A0A0B4J2F2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
LOC102724428A0A0B4J2F2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
LOC102724428A0A0B4J2F2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
LOC102724428A0A0B4J2F2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
LOC102724428A0A0B4J2F2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LOC102724428A0A0B4J2F2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.87■■■□□ 2.69
LOC102724428A0A0B4J2F2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LOC102724428A0A0B4J2F2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
LOC102724428A0A0B4J2F2 AL031848.2-201ENST00000607670 837 ntBASIC31.87■■■□□ 2.69
LOC102724428A0A0B4J2F2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LOC102724428A0A0B4J2F2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.86■■■□□ 2.69
LOC102724428A0A0B4J2F2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LOC102724428A0A0B4J2F2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.86■■■□□ 2.69
LOC102724428A0A0B4J2F2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
LOC102724428A0A0B4J2F2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
LOC102724428A0A0B4J2F2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
LOC102724428A0A0B4J2F2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
LOC102724428A0A0B4J2F2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
LOC102724428A0A0B4J2F2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
LOC102724428A0A0B4J2F2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
LOC102724428A0A0B4J2F2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.84■■■□□ 2.69
LOC102724428A0A0B4J2F2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
LOC102724428A0A0B4J2F2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
LOC102724428A0A0B4J2F2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.82■■■□□ 2.68
LOC102724428A0A0B4J2F2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.82■■■□□ 2.68
LOC102724428A0A0B4J2F2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
LOC102724428A0A0B4J2F2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
LOC102724428A0A0B4J2F2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
LOC102724428A0A0B4J2F2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
LOC102724428A0A0B4J2F2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
LOC102724428A0A0B4J2F2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
LOC102724428A0A0B4J2F2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
LOC102724428A0A0B4J2F2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
LOC102724428A0A0B4J2F2 AL356441.2-201ENST00000443009 864 ntBASIC31.8■■■□□ 2.68
LOC102724428A0A0B4J2F2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC31.8■■■□□ 2.68
LOC102724428A0A0B4J2F2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
LOC102724428A0A0B4J2F2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.79■■■□□ 2.68
LOC102724428A0A0B4J2F2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
LOC102724428A0A0B4J2F2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.78■■■□□ 2.68
LOC102724428A0A0B4J2F2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.78■■■□□ 2.68
LOC102724428A0A0B4J2F2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.78■■■□□ 2.68
LOC102724428A0A0B4J2F2 AC019171.1-201ENST00000601251 1056 ntBASIC31.78■■■□□ 2.68
LOC102724428A0A0B4J2F2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
LOC102724428A0A0B4J2F2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
LOC102724428A0A0B4J2F2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.77■■■□□ 2.68
LOC102724428A0A0B4J2F2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
LOC102724428A0A0B4J2F2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.76■■■□□ 2.68
LOC102724428A0A0B4J2F2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
LOC102724428A0A0B4J2F2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
LOC102724428A0A0B4J2F2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
LOC102724428A0A0B4J2F2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.76■■■□□ 2.67
LOC102724428A0A0B4J2F2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.75■■■□□ 2.67
LOC102724428A0A0B4J2F2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
LOC102724428A0A0B4J2F2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.75■■■□□ 2.67
LOC102724428A0A0B4J2F2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.74■■■□□ 2.67
LOC102724428A0A0B4J2F2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
LOC102724428A0A0B4J2F2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.74■■■□□ 2.67
LOC102724428A0A0B4J2F2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
LOC102724428A0A0B4J2F2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
LOC102724428A0A0B4J2F2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
LOC102724428A0A0B4J2F2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
LOC102724428A0A0B4J2F2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.73■■■□□ 2.67
LOC102724428A0A0B4J2F2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.73■■■□□ 2.67
LOC102724428A0A0B4J2F2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
LOC102724428A0A0B4J2F2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.72■■■□□ 2.67
LOC102724428A0A0B4J2F2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
LOC102724428A0A0B4J2F2 AC087393.1-201ENST00000582896 145 ntBASIC31.72■■■□□ 2.67
LOC102724428A0A0B4J2F2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
LOC102724428A0A0B4J2F2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.71■■■□□ 2.67
LOC102724428A0A0B4J2F2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
LOC102724428A0A0B4J2F2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
LOC102724428A0A0B4J2F2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
LOC102724428A0A0B4J2F2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
LOC102724428A0A0B4J2F2 WHAMMP3-201ENST00000611636 1609 ntBASIC31.7■■■□□ 2.66
LOC102724428A0A0B4J2F2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.66
LOC102724428A0A0B4J2F2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
LOC102724428A0A0B4J2F2 AC239859.2-201ENST00000444165 318 ntBASIC31.69■■■□□ 2.66
LOC102724428A0A0B4J2F2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
LOC102724428A0A0B4J2F2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
LOC102724428A0A0B4J2F2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
LOC102724428A0A0B4J2F2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
LOC102724428A0A0B4J2F2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
LOC102724428A0A0B4J2F2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
LOC102724428A0A0B4J2F2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.68■■■□□ 2.66
LOC102724428A0A0B4J2F2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.68■■■□□ 2.66
LOC102724428A0A0B4J2F2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
LOC102724428A0A0B4J2F2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
LOC102724428A0A0B4J2F2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms