Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.43■□□□□ 0.7
TRBV9A0A0B4J1U6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.43■□□□□ 0.7
TRBV9A0A0B4J1U6 WHAMMP3-201ENST00000611636 1609 ntBASIC19.43■□□□□ 0.7
TRBV9A0A0B4J1U6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV9A0A0B4J1U6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.42■□□□□ 0.7
TRBV9A0A0B4J1U6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV9A0A0B4J1U6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.42■□□□□ 0.7
TRBV9A0A0B4J1U6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV9A0A0B4J1U6 MIR639-201ENST00000384974 98 ntBASIC19.42■□□□□ 0.7
TRBV9A0A0B4J1U6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
TRBV9A0A0B4J1U6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV9A0A0B4J1U6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV9A0A0B4J1U6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV9A0A0B4J1U6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV9A0A0B4J1U6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV9A0A0B4J1U6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV9A0A0B4J1U6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV9A0A0B4J1U6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV9A0A0B4J1U6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TRBV9A0A0B4J1U6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV9A0A0B4J1U6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.41■□□□□ 0.7
TRBV9A0A0B4J1U6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV9A0A0B4J1U6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TRBV9A0A0B4J1U6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRBV9A0A0B4J1U6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.4■□□□□ 0.7
TRBV9A0A0B4J1U6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV9A0A0B4J1U6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRBV9A0A0B4J1U6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.4■□□□□ 0.7
TRBV9A0A0B4J1U6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV9A0A0B4J1U6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRBV9A0A0B4J1U6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV9A0A0B4J1U6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRBV9A0A0B4J1U6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TRBV9A0A0B4J1U6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRBV9A0A0B4J1U6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV9A0A0B4J1U6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TRBV9A0A0B4J1U6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV9A0A0B4J1U6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TRBV9A0A0B4J1U6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.39■□□□□ 0.69
TRBV9A0A0B4J1U6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV9A0A0B4J1U6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV9A0A0B4J1U6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV9A0A0B4J1U6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV9A0A0B4J1U6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV9A0A0B4J1U6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV9A0A0B4J1U6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV9A0A0B4J1U6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.38■□□□□ 0.69
TRBV9A0A0B4J1U6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.38■□□□□ 0.69
TRBV9A0A0B4J1U6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV9A0A0B4J1U6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV9A0A0B4J1U6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV9A0A0B4J1U6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV9A0A0B4J1U6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV9A0A0B4J1U6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.37■□□□□ 0.69
TRBV9A0A0B4J1U6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV9A0A0B4J1U6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV9A0A0B4J1U6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV9A0A0B4J1U6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV9A0A0B4J1U6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV9A0A0B4J1U6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV9A0A0B4J1U6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV9A0A0B4J1U6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV9A0A0B4J1U6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
TRBV9A0A0B4J1U6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRBV9A0A0B4J1U6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV9A0A0B4J1U6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV9A0A0B4J1U6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TRBV9A0A0B4J1U6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV9A0A0B4J1U6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV9A0A0B4J1U6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRBV9A0A0B4J1U6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TRBV9A0A0B4J1U6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV9A0A0B4J1U6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV9A0A0B4J1U6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV9A0A0B4J1U6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.34■□□□□ 0.69
TRBV9A0A0B4J1U6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV9A0A0B4J1U6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV9A0A0B4J1U6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV9A0A0B4J1U6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV9A0A0B4J1U6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV9A0A0B4J1U6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV9A0A0B4J1U6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV9A0A0B4J1U6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.33■□□□□ 0.68
TRBV9A0A0B4J1U6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV9A0A0B4J1U6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV9A0A0B4J1U6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV9A0A0B4J1U6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV9A0A0B4J1U6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV9A0A0B4J1U6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRBV9A0A0B4J1U6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV9A0A0B4J1U6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV9A0A0B4J1U6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV9A0A0B4J1U6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV9A0A0B4J1U6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV9A0A0B4J1U6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV9A0A0B4J1U6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV9A0A0B4J1U6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TRBV9A0A0B4J1U6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.3■□□□□ 0.68
TRBV9A0A0B4J1U6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV9A0A0B4J1U6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms