Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.49
TNFRSF11AQ9Y6Q6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
TNFRSF11AQ9Y6Q6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
TNFRSF11AQ9Y6Q6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TNFRSF11AQ9Y6Q6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TNFRSF11AQ9Y6Q6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TNFRSF11AQ9Y6Q6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TNFRSF11AQ9Y6Q6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TNFRSF11AQ9Y6Q6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
TNFRSF11AQ9Y6Q6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TNFRSF11AQ9Y6Q6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.62■■■□□ 2.49
TNFRSF11AQ9Y6Q6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
TNFRSF11AQ9Y6Q6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TNFRSF11AQ9Y6Q6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TNFRSF11AQ9Y6Q6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.61■■■□□ 2.49
TNFRSF11AQ9Y6Q6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
TNFRSF11AQ9Y6Q6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
TNFRSF11AQ9Y6Q6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.61■■■□□ 2.49
TNFRSF11AQ9Y6Q6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TNFRSF11AQ9Y6Q6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
TNFRSF11AQ9Y6Q6 AL449106.1-201ENST00000608517 1980 ntBASIC30.6■■■□□ 2.49
TNFRSF11AQ9Y6Q6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TNFRSF11AQ9Y6Q6 WHAMMP3-201ENST00000611636 1609 ntBASIC30.59■■■□□ 2.49
TNFRSF11AQ9Y6Q6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TNFRSF11AQ9Y6Q6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
TNFRSF11AQ9Y6Q6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TNFRSF11AQ9Y6Q6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TNFRSF11AQ9Y6Q6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30.57■■■□□ 2.48
TNFRSF11AQ9Y6Q6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TNFRSF11AQ9Y6Q6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TNFRSF11AQ9Y6Q6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TNFRSF11AQ9Y6Q6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TNFRSF11AQ9Y6Q6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.56■■■□□ 2.48
TNFRSF11AQ9Y6Q6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
TNFRSF11AQ9Y6Q6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
TNFRSF11AQ9Y6Q6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
TNFRSF11AQ9Y6Q6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
TNFRSF11AQ9Y6Q6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.54■■■□□ 2.48
TNFRSF11AQ9Y6Q6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TNFRSF11AQ9Y6Q6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.53■■■□□ 2.48
TNFRSF11AQ9Y6Q6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
TNFRSF11AQ9Y6Q6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC30.51■■■□□ 2.47
TNFRSF11AQ9Y6Q6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.51■■■□□ 2.47
TNFRSF11AQ9Y6Q6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TNFRSF11AQ9Y6Q6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TNFRSF11AQ9Y6Q6 ECEL1P2-201ENST00000461596 1295 ntBASIC30.5■■■□□ 2.47
TNFRSF11AQ9Y6Q6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
TNFRSF11AQ9Y6Q6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.49■■■□□ 2.47
TNFRSF11AQ9Y6Q6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TNFRSF11AQ9Y6Q6 AC126177.7-201ENST00000547904 679 ntBASIC30.49■■■□□ 2.47
TNFRSF11AQ9Y6Q6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
TNFRSF11AQ9Y6Q6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.48■■■□□ 2.47
TNFRSF11AQ9Y6Q6 AL359504.2-201ENST00000605506 1601 ntBASIC30.47■■■□□ 2.47
TNFRSF11AQ9Y6Q6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.47■■■□□ 2.47
TNFRSF11AQ9Y6Q6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
TNFRSF11AQ9Y6Q6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TNFRSF11AQ9Y6Q6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TNFRSF11AQ9Y6Q6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TNFRSF11AQ9Y6Q6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
TNFRSF11AQ9Y6Q6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
TNFRSF11AQ9Y6Q6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TNFRSF11AQ9Y6Q6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
TNFRSF11AQ9Y6Q6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
TNFRSF11AQ9Y6Q6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TNFRSF11AQ9Y6Q6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
TNFRSF11AQ9Y6Q6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
TNFRSF11AQ9Y6Q6 AC025884.2-201ENST00000553429 711 ntBASIC30.45■■■□□ 2.47
TNFRSF11AQ9Y6Q6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
TNFRSF11AQ9Y6Q6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.45■■■□□ 2.46
TNFRSF11AQ9Y6Q6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
TNFRSF11AQ9Y6Q6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
TNFRSF11AQ9Y6Q6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
TNFRSF11AQ9Y6Q6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TNFRSF11AQ9Y6Q6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TNFRSF11AQ9Y6Q6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.44■■■□□ 2.46
TNFRSF11AQ9Y6Q6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.43■■■□□ 2.46
TNFRSF11AQ9Y6Q6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.43■■■□□ 2.46
TNFRSF11AQ9Y6Q6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.43■■■□□ 2.46
TNFRSF11AQ9Y6Q6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
TNFRSF11AQ9Y6Q6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TNFRSF11AQ9Y6Q6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
TNFRSF11AQ9Y6Q6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.4■■■□□ 2.46
TNFRSF11AQ9Y6Q6 ABHD17AP5-201ENST00000580133 923 ntBASIC30.4■■■□□ 2.46
TNFRSF11AQ9Y6Q6 U85056.1-201ENST00000616429 682 ntBASIC30.4■■■□□ 2.46
TNFRSF11AQ9Y6Q6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
TNFRSF11AQ9Y6Q6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
TNFRSF11AQ9Y6Q6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
TNFRSF11AQ9Y6Q6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
TNFRSF11AQ9Y6Q6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
TNFRSF11AQ9Y6Q6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
TNFRSF11AQ9Y6Q6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TNFRSF11AQ9Y6Q6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.37■■■□□ 2.45
TNFRSF11AQ9Y6Q6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.37■■■□□ 2.45
TNFRSF11AQ9Y6Q6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.37■■■□□ 2.45
TNFRSF11AQ9Y6Q6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.37■■■□□ 2.45
TNFRSF11AQ9Y6Q6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
TNFRSF11AQ9Y6Q6 SMPD5-203ENST00000639008 1464 ntBASIC30.37■■■□□ 2.45
TNFRSF11AQ9Y6Q6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
TNFRSF11AQ9Y6Q6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
TNFRSF11AQ9Y6Q6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms