Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.34■■□□□ 1.81
CDH9Q9ULB4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.34■■□□□ 1.81
CDH9Q9ULB4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDH9Q9ULB4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.33■■□□□ 1.81
CDH9Q9ULB4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.33■■□□□ 1.81
CDH9Q9ULB4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDH9Q9ULB4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CDH9Q9ULB4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CDH9Q9ULB4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
CDH9Q9ULB4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDH9Q9ULB4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDH9Q9ULB4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDH9Q9ULB4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDH9Q9ULB4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDH9Q9ULB4 SMPD5-203ENST00000639008 1464 ntBASIC26.31■■□□□ 1.8
CDH9Q9ULB4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.31■■□□□ 1.8
CDH9Q9ULB4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CDH9Q9ULB4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.3■■□□□ 1.8
CDH9Q9ULB4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.3■■□□□ 1.8
CDH9Q9ULB4 AC025884.2-201ENST00000553429 711 ntBASIC26.3■■□□□ 1.8
CDH9Q9ULB4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CDH9Q9ULB4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CDH9Q9ULB4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CDH9Q9ULB4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.29■■□□□ 1.8
CDH9Q9ULB4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CDH9Q9ULB4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CDH9Q9ULB4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.29■■□□□ 1.8
CDH9Q9ULB4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDH9Q9ULB4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CDH9Q9ULB4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CDH9Q9ULB4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDH9Q9ULB4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CDH9Q9ULB4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
CDH9Q9ULB4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.28■■□□□ 1.8
CDH9Q9ULB4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CDH9Q9ULB4 AC007029.1-201ENST00000604183 313 ntBASIC26.27■■□□□ 1.8
CDH9Q9ULB4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDH9Q9ULB4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDH9Q9ULB4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDH9Q9ULB4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CDH9Q9ULB4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDH9Q9ULB4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.26■■□□□ 1.79
CDH9Q9ULB4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CDH9Q9ULB4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.26■■□□□ 1.79
CDH9Q9ULB4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.26■■□□□ 1.79
CDH9Q9ULB4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.26■■□□□ 1.79
CDH9Q9ULB4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.25■■□□□ 1.79
CDH9Q9ULB4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CDH9Q9ULB4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.25■■□□□ 1.79
CDH9Q9ULB4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.24■■□□□ 1.79
CDH9Q9ULB4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CDH9Q9ULB4 AL359504.2-201ENST00000605506 1601 ntBASIC26.24■■□□□ 1.79
CDH9Q9ULB4 AL449106.1-201ENST00000608517 1980 ntBASIC26.24■■□□□ 1.79
CDH9Q9ULB4 NTF6A-201ENST00000591175 560 ntBASIC26.23■■□□□ 1.79
CDH9Q9ULB4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDH9Q9ULB4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDH9Q9ULB4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
CDH9Q9ULB4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDH9Q9ULB4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.22■■□□□ 1.79
CDH9Q9ULB4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDH9Q9ULB4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.21■■□□□ 1.79
CDH9Q9ULB4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
CDH9Q9ULB4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.2■■□□□ 1.79
CDH9Q9ULB4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CDH9Q9ULB4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
CDH9Q9ULB4 U85056.1-201ENST00000616429 682 ntBASIC26.2■■□□□ 1.78
CDH9Q9ULB4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDH9Q9ULB4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDH9Q9ULB4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CDH9Q9ULB4 MIR3960-201ENST00000583311 91 ntBASIC26.18■■□□□ 1.78
CDH9Q9ULB4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
CDH9Q9ULB4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CDH9Q9ULB4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CDH9Q9ULB4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDH9Q9ULB4 RP9P-202ENST00000450133 1212 ntBASIC26.17■■□□□ 1.78
CDH9Q9ULB4 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.17■■□□□ 1.78
CDH9Q9ULB4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDH9Q9ULB4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.17■■□□□ 1.78
CDH9Q9ULB4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
CDH9Q9ULB4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.16■■□□□ 1.78
CDH9Q9ULB4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDH9Q9ULB4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.16■■□□□ 1.78
CDH9Q9ULB4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDH9Q9ULB4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.16■■□□□ 1.78
CDH9Q9ULB4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDH9Q9ULB4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CDH9Q9ULB4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDH9Q9ULB4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CDH9Q9ULB4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CDH9Q9ULB4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CDH9Q9ULB4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.13■■□□□ 1.77
CDH9Q9ULB4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CDH9Q9ULB4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDH9Q9ULB4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.13■■□□□ 1.77
CDH9Q9ULB4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CDH9Q9ULB4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.12■■□□□ 1.77
CDH9Q9ULB4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
CDH9Q9ULB4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDH9Q9ULB4 AC093536.1-201ENST00000569153 554 ntBASIC26.12■■□□□ 1.77
CDH9Q9ULB4 AC026202.3-201ENST00000600805 1127 ntBASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms