Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.34■■■□□ 2.13
COL20A1Q9P218 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.34■■■□□ 2.13
COL20A1Q9P218 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.34■■■□□ 2.13
COL20A1Q9P218 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
COL20A1Q9P218 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
COL20A1Q9P218 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
COL20A1Q9P218 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.33■■■□□ 2.13
COL20A1Q9P218 AC009831.1-201ENST00000580420 1582 ntBASIC28.33■■■□□ 2.12
COL20A1Q9P218 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
COL20A1Q9P218 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
COL20A1Q9P218 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
COL20A1Q9P218 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
COL20A1Q9P218 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
COL20A1Q9P218 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.3■■■□□ 2.12
COL20A1Q9P218 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.29■■■□□ 2.12
COL20A1Q9P218 AL033527.3-201ENST00000566366 1196 ntBASIC28.29■■■□□ 2.12
COL20A1Q9P218 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
COL20A1Q9P218 WHAMMP3-201ENST00000611636 1609 ntBASIC28.29■■■□□ 2.12
COL20A1Q9P218 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
COL20A1Q9P218 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
COL20A1Q9P218 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
COL20A1Q9P218 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
COL20A1Q9P218 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.28■■■□□ 2.12
COL20A1Q9P218 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL20A1Q9P218 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
COL20A1Q9P218 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.27■■■□□ 2.12
COL20A1Q9P218 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
COL20A1Q9P218 AC026202.3-201ENST00000600805 1127 ntBASIC28.27■■■□□ 2.12
COL20A1Q9P218 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
COL20A1Q9P218 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL20A1Q9P218 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
COL20A1Q9P218 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
COL20A1Q9P218 AC004987.1-201ENST00000428627 508 ntBASIC28.26■■■□□ 2.11
COL20A1Q9P218 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
COL20A1Q9P218 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
COL20A1Q9P218 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
COL20A1Q9P218 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
COL20A1Q9P218 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
COL20A1Q9P218 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
COL20A1Q9P218 AL592293.1-201ENST00000502889 1188 ntBASIC28.25■■■□□ 2.11
COL20A1Q9P218 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
COL20A1Q9P218 AC133552.2-201ENST00000619106 1032 ntBASIC28.25■■■□□ 2.11
COL20A1Q9P218 AL359504.2-201ENST00000605506 1601 ntBASIC28.25■■■□□ 2.11
COL20A1Q9P218 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
COL20A1Q9P218 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
COL20A1Q9P218 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
COL20A1Q9P218 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.24■■■□□ 2.11
COL20A1Q9P218 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
COL20A1Q9P218 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
COL20A1Q9P218 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
COL20A1Q9P218 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL20A1Q9P218 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL20A1Q9P218 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.23■■■□□ 2.11
COL20A1Q9P218 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL20A1Q9P218 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL20A1Q9P218 ATP5G2P3-201ENST00000429083 425 ntBASIC28.22■■■□□ 2.11
COL20A1Q9P218 RP9P-202ENST00000450133 1212 ntBASIC28.22■■■□□ 2.11
COL20A1Q9P218 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.22■■■□□ 2.11
COL20A1Q9P218 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
COL20A1Q9P218 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.21■■■□□ 2.11
COL20A1Q9P218 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL20A1Q9P218 AC093536.1-201ENST00000569153 554 ntBASIC28.21■■■□□ 2.11
COL20A1Q9P218 AC129492.7-201ENST00000622992 756 ntBASIC28.21■■■□□ 2.11
COL20A1Q9P218 LINC01003-201ENST00000564834 1764 ntBASIC28.21■■■□□ 2.11
COL20A1Q9P218 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.2■■■□□ 2.11
COL20A1Q9P218 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
COL20A1Q9P218 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.2■■■□□ 2.11
COL20A1Q9P218 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
COL20A1Q9P218 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
COL20A1Q9P218 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.2■■■□□ 2.1
COL20A1Q9P218 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
COL20A1Q9P218 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
COL20A1Q9P218 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL20A1Q9P218 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL20A1Q9P218 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL20A1Q9P218 TSPY13P-201ENST00000338964 914 ntBASIC28.19■■■□□ 2.1
COL20A1Q9P218 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL20A1Q9P218 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
COL20A1Q9P218 RAP2CP1-202ENST00000605179 643 ntBASIC28.19■■■□□ 2.1
COL20A1Q9P218 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
COL20A1Q9P218 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
COL20A1Q9P218 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.18■■■□□ 2.1
COL20A1Q9P218 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
COL20A1Q9P218 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
COL20A1Q9P218 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.17■■■□□ 2.1
COL20A1Q9P218 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
COL20A1Q9P218 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.16■■■□□ 2.1
COL20A1Q9P218 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC28.15■■■□□ 2.1
COL20A1Q9P218 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL20A1Q9P218 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.15■■■□□ 2.1
COL20A1Q9P218 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
COL20A1Q9P218 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.14■■■□□ 2.1
COL20A1Q9P218 MIR3960-201ENST00000583311 91 ntBASIC28.14■■■□□ 2.1
COL20A1Q9P218 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.14■■■□□ 2.1
COL20A1Q9P218 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.14■■■□□ 2.1
COL20A1Q9P218 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.14■■■□□ 2.09
COL20A1Q9P218 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.13■■■□□ 2.09
COL20A1Q9P218 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
COL20A1Q9P218 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.13■■■□□ 2.09
COL20A1Q9P218 AL449106.1-201ENST00000608517 1980 ntBASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms