Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
CHMP4BQ9H444 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP4BQ9H444 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP4BQ9H444 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP4BQ9H444 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHMP4BQ9H444 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHMP4BQ9H444 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHMP4BQ9H444 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
CHMP4BQ9H444 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
CHMP4BQ9H444 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHMP4BQ9H444 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHMP4BQ9H444 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHMP4BQ9H444 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.23■■■□□ 2.59
CHMP4BQ9H444 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHMP4BQ9H444 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.22■■■□□ 2.59
CHMP4BQ9H444 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHMP4BQ9H444 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
CHMP4BQ9H444 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHMP4BQ9H444 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.2■■■□□ 2.59
CHMP4BQ9H444 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CHMP4BQ9H444 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.2■■■□□ 2.59
CHMP4BQ9H444 MIR7108-201ENST00000614319 87 ntBASIC31.2■■■□□ 2.59
CHMP4BQ9H444 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.2■■■□□ 2.58
CHMP4BQ9H444 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.2■■■□□ 2.58
CHMP4BQ9H444 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHMP4BQ9H444 AC016575.1-201ENST00000607026 382 ntBASIC31.19■■■□□ 2.58
CHMP4BQ9H444 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.19■■■□□ 2.58
CHMP4BQ9H444 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CHMP4BQ9H444 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CHMP4BQ9H444 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.17■■■□□ 2.58
CHMP4BQ9H444 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHMP4BQ9H444 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
CHMP4BQ9H444 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHMP4BQ9H444 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHMP4BQ9H444 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
CHMP4BQ9H444 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.15■■■□□ 2.58
CHMP4BQ9H444 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHMP4BQ9H444 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CHMP4BQ9H444 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHMP4BQ9H444 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHMP4BQ9H444 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.13■■■□□ 2.57
CHMP4BQ9H444 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CHMP4BQ9H444 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CHMP4BQ9H444 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.13■■■□□ 2.57
CHMP4BQ9H444 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CHMP4BQ9H444 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.12■■■□□ 2.57
CHMP4BQ9H444 AC126177.7-201ENST00000547904 679 ntBASIC31.12■■■□□ 2.57
CHMP4BQ9H444 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHMP4BQ9H444 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.12■■■□□ 2.57
CHMP4BQ9H444 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.12■■■□□ 2.57
CHMP4BQ9H444 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CHMP4BQ9H444 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHMP4BQ9H444 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHMP4BQ9H444 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.11■■■□□ 2.57
CHMP4BQ9H444 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHMP4BQ9H444 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.11■■■□□ 2.57
CHMP4BQ9H444 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHMP4BQ9H444 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHMP4BQ9H444 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CHMP4BQ9H444 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CHMP4BQ9H444 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
CHMP4BQ9H444 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
CHMP4BQ9H444 AL359258.2-201ENST00000564063 1566 ntBASIC31.08■■■□□ 2.57
CHMP4BQ9H444 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHMP4BQ9H444 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHMP4BQ9H444 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CHMP4BQ9H444 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.07■■■□□ 2.56
CHMP4BQ9H444 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHMP4BQ9H444 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHMP4BQ9H444 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.07■■■□□ 2.56
CHMP4BQ9H444 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CHMP4BQ9H444 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.04■■■□□ 2.56
CHMP4BQ9H444 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CHMP4BQ9H444 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.04■■■□□ 2.56
CHMP4BQ9H444 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CHMP4BQ9H444 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.04■■■□□ 2.56
CHMP4BQ9H444 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CHMP4BQ9H444 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.03■■■□□ 2.56
CHMP4BQ9H444 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHMP4BQ9H444 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.02■■■□□ 2.56
CHMP4BQ9H444 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CHMP4BQ9H444 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CHMP4BQ9H444 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CHMP4BQ9H444 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CHMP4BQ9H444 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CHMP4BQ9H444 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.01■■■□□ 2.55
CHMP4BQ9H444 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.01■■■□□ 2.55
CHMP4BQ9H444 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31■■■□□ 2.55
CHMP4BQ9H444 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31■■■□□ 2.55
CHMP4BQ9H444 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31■■■□□ 2.55
CHMP4BQ9H444 MIR639-201ENST00000384974 98 ntBASIC31■■■□□ 2.55
CHMP4BQ9H444 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31■■■□□ 2.55
CHMP4BQ9H444 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31■■■□□ 2.55
CHMP4BQ9H444 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31■■■□□ 2.55
CHMP4BQ9H444 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
CHMP4BQ9H444 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CHMP4BQ9H444 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CHMP4BQ9H444 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.99■■■□□ 2.55
CHMP4BQ9H444 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.99■■■□□ 2.55
CHMP4BQ9H444 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms