Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
VPS11Q9H270 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
VPS11Q9H270 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.74■■□□□ 1.55
VPS11Q9H270 AC110285.7-201ENST00000624417 1536 ntBASIC24.74■■□□□ 1.55
VPS11Q9H270 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.74■■□□□ 1.55
VPS11Q9H270 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
VPS11Q9H270 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
VPS11Q9H270 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
VPS11Q9H270 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
VPS11Q9H270 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.73■■□□□ 1.55
VPS11Q9H270 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.73■■□□□ 1.55
VPS11Q9H270 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
VPS11Q9H270 AP004609.3-201ENST00000610705 1884 ntBASIC24.72■■□□□ 1.55
VPS11Q9H270 AL162393.1-201ENST00000437852 946 ntBASIC24.72■■□□□ 1.55
VPS11Q9H270 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.71■■□□□ 1.55
VPS11Q9H270 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
VPS11Q9H270 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
VPS11Q9H270 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
VPS11Q9H270 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.7■■□□□ 1.55
VPS11Q9H270 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.7■■□□□ 1.54
VPS11Q9H270 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
VPS11Q9H270 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.7■■□□□ 1.54
VPS11Q9H270 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.7■■□□□ 1.54
VPS11Q9H270 AC044849.2-201ENST00000606596 710 ntBASIC24.7■■□□□ 1.54
VPS11Q9H270 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
VPS11Q9H270 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.7■■□□□ 1.54
VPS11Q9H270 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
VPS11Q9H270 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.69■■□□□ 1.54
VPS11Q9H270 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
VPS11Q9H270 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
VPS11Q9H270 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.69■■□□□ 1.54
VPS11Q9H270 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
VPS11Q9H270 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.68■■□□□ 1.54
VPS11Q9H270 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS11Q9H270 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
VPS11Q9H270 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
VPS11Q9H270 AC093323.1-202ENST00000635031 2045 ntBASIC24.68■■□□□ 1.54
VPS11Q9H270 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
VPS11Q9H270 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
VPS11Q9H270 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.67■■□□□ 1.54
VPS11Q9H270 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
VPS11Q9H270 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
VPS11Q9H270 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.66■■□□□ 1.54
VPS11Q9H270 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.66■■□□□ 1.54
VPS11Q9H270 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
VPS11Q9H270 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
VPS11Q9H270 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
VPS11Q9H270 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS11Q9H270 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS11Q9H270 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.65■■□□□ 1.54
VPS11Q9H270 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
VPS11Q9H270 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
VPS11Q9H270 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
VPS11Q9H270 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.64■■□□□ 1.54
VPS11Q9H270 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
VPS11Q9H270 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
VPS11Q9H270 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
VPS11Q9H270 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
VPS11Q9H270 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
VPS11Q9H270 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS11Q9H270 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.62■■□□□ 1.53
VPS11Q9H270 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
VPS11Q9H270 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
VPS11Q9H270 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS11Q9H270 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS11Q9H270 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
VPS11Q9H270 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
VPS11Q9H270 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS11Q9H270 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
VPS11Q9H270 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
VPS11Q9H270 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.61■■□□□ 1.53
VPS11Q9H270 AC021231.2-201ENST00000594613 730 ntBASIC24.61■■□□□ 1.53
VPS11Q9H270 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.61■■□□□ 1.53
VPS11Q9H270 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.61■■□□□ 1.53
VPS11Q9H270 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
VPS11Q9H270 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
VPS11Q9H270 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
VPS11Q9H270 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
VPS11Q9H270 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
VPS11Q9H270 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
VPS11Q9H270 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
VPS11Q9H270 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
VPS11Q9H270 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
VPS11Q9H270 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
VPS11Q9H270 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
VPS11Q9H270 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.59■■□□□ 1.53
VPS11Q9H270 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
VPS11Q9H270 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.59■■□□□ 1.53
VPS11Q9H270 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
VPS11Q9H270 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
VPS11Q9H270 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
VPS11Q9H270 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
VPS11Q9H270 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
VPS11Q9H270 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
VPS11Q9H270 WHAMMP3-201ENST00000611636 1609 ntBASIC24.57■■□□□ 1.52
VPS11Q9H270 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS11Q9H270 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
VPS11Q9H270 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS11Q9H270 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS11Q9H270 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 473.3 ms