Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC32.72■■■□□ 2.83
PCDH11XQ9BZA7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
PCDH11XQ9BZA7 AC010980.1-201ENST00000587192 1142 ntBASIC32.72■■■□□ 2.83
PCDH11XQ9BZA7 BHLHE23-202ENST00000612929 1109 ntBASIC32.71■■■□□ 2.83
PCDH11XQ9BZA7 AC074183.2-201ENST00000623112 922 ntBASIC32.71■■■□□ 2.83
PCDH11XQ9BZA7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC32.71■■■□□ 2.83
PCDH11XQ9BZA7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
PCDH11XQ9BZA7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC32.7■■■□□ 2.83
PCDH11XQ9BZA7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC32.7■■■□□ 2.82
PCDH11XQ9BZA7 MIR6765-201ENST00000614092 87 ntBASIC32.7■■■□□ 2.82
PCDH11XQ9BZA7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
PCDH11XQ9BZA7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.69■■■□□ 2.82
PCDH11XQ9BZA7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
PCDH11XQ9BZA7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
PCDH11XQ9BZA7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.68■■■□□ 2.82
PCDH11XQ9BZA7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PCDH11XQ9BZA7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC32.67■■■□□ 2.82
PCDH11XQ9BZA7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
PCDH11XQ9BZA7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
PCDH11XQ9BZA7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
PCDH11XQ9BZA7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
PCDH11XQ9BZA7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC32.64■■■□□ 2.82
PCDH11XQ9BZA7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC32.64■■■□□ 2.82
PCDH11XQ9BZA7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
PCDH11XQ9BZA7 AC139795.1-202ENST00000500444 432 ntBASIC32.64■■■□□ 2.82
PCDH11XQ9BZA7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC32.64■■■□□ 2.82
PCDH11XQ9BZA7 KRT8P33-201ENST00000508125 1423 ntBASIC32.64■■■□□ 2.82
PCDH11XQ9BZA7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC32.63■■■□□ 2.81
PCDH11XQ9BZA7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC32.63■■■□□ 2.81
PCDH11XQ9BZA7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC32.62■■■□□ 2.81
PCDH11XQ9BZA7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC32.62■■■□□ 2.81
PCDH11XQ9BZA7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PCDH11XQ9BZA7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC32.62■■■□□ 2.81
PCDH11XQ9BZA7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PCDH11XQ9BZA7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PCDH11XQ9BZA7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
PCDH11XQ9BZA7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC32.61■■■□□ 2.81
PCDH11XQ9BZA7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
PCDH11XQ9BZA7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
PCDH11XQ9BZA7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC32.61■■■□□ 2.81
PCDH11XQ9BZA7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PCDH11XQ9BZA7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC32.6■■■□□ 2.81
PCDH11XQ9BZA7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PCDH11XQ9BZA7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PCDH11XQ9BZA7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PCDH11XQ9BZA7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PCDH11XQ9BZA7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
PCDH11XQ9BZA7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
PCDH11XQ9BZA7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC32.59■■■□□ 2.81
PCDH11XQ9BZA7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
PCDH11XQ9BZA7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
PCDH11XQ9BZA7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC32.58■■■□□ 2.81
PCDH11XQ9BZA7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
PCDH11XQ9BZA7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
PCDH11XQ9BZA7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC32.58■■■□□ 2.81
PCDH11XQ9BZA7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
PCDH11XQ9BZA7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC32.58■■■□□ 2.81
PCDH11XQ9BZA7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
PCDH11XQ9BZA7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
PCDH11XQ9BZA7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC32.57■■■□□ 2.8
PCDH11XQ9BZA7 HYI-210ENST00000486909 905 ntTSL 5 BASIC32.57■■■□□ 2.8
PCDH11XQ9BZA7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC32.57■■■□□ 2.8
PCDH11XQ9BZA7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
PCDH11XQ9BZA7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC32.56■■■□□ 2.8
PCDH11XQ9BZA7 AC009299.2-201ENST00000482477 511 ntBASIC32.56■■■□□ 2.8
PCDH11XQ9BZA7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC32.56■■■□□ 2.8
PCDH11XQ9BZA7 AC103834.1-201ENST00000520383 144 ntBASIC32.56■■■□□ 2.8
PCDH11XQ9BZA7 AC018755.3-202ENST00000596210 929 ntBASIC32.56■■■□□ 2.8
PCDH11XQ9BZA7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
PCDH11XQ9BZA7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PCDH11XQ9BZA7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
PCDH11XQ9BZA7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PCDH11XQ9BZA7 PVT1_1.1-201ENST00000615125 194 ntBASIC32.55■■■□□ 2.8
PCDH11XQ9BZA7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PCDH11XQ9BZA7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PCDH11XQ9BZA7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
PCDH11XQ9BZA7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PCDH11XQ9BZA7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PCDH11XQ9BZA7 YBX1P4-201ENST00000392794 808 ntBASIC32.53■■■□□ 2.8
PCDH11XQ9BZA7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
PCDH11XQ9BZA7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
PCDH11XQ9BZA7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
PCDH11XQ9BZA7 AL359504.2-201ENST00000605506 1601 ntBASIC32.52■■■□□ 2.8
PCDH11XQ9BZA7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC32.51■■■□□ 2.8
PCDH11XQ9BZA7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.79
PCDH11XQ9BZA7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
PCDH11XQ9BZA7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC32.51■■■□□ 2.79
PCDH11XQ9BZA7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PCDH11XQ9BZA7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC32.5■■■□□ 2.79
PCDH11XQ9BZA7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PCDH11XQ9BZA7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
PCDH11XQ9BZA7 MIR4508-201ENST00000584178 70 ntBASIC32.48■■■□□ 2.79
PCDH11XQ9BZA7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC32.47■■■□□ 2.79
PCDH11XQ9BZA7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
PCDH11XQ9BZA7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
PCDH11XQ9BZA7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
PCDH11XQ9BZA7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
PCDH11XQ9BZA7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC32.47■■■□□ 2.79
PCDH11XQ9BZA7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC32.47■■■□□ 2.79
PCDH11XQ9BZA7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms