Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CNTNAP3BQ96NU0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.88■■□□□ 1.41
CNTNAP3BQ96NU0 UNC93B8-201ENST00000511903 705 ntBASIC23.88■■□□□ 1.41
CNTNAP3BQ96NU0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.88■■□□□ 1.41
CNTNAP3BQ96NU0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CNTNAP3BQ96NU0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CNTNAP3BQ96NU0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
CNTNAP3BQ96NU0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CNTNAP3BQ96NU0 AC018755.3-202ENST00000596210 929 ntBASIC23.87■■□□□ 1.41
CNTNAP3BQ96NU0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CNTNAP3BQ96NU0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.87■■□□□ 1.41
CNTNAP3BQ96NU0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.86■■□□□ 1.41
CNTNAP3BQ96NU0 AC131281.2-201ENST00000520478 145 ntBASIC23.86■■□□□ 1.41
CNTNAP3BQ96NU0 RAP2CP1-202ENST00000605179 643 ntBASIC23.86■■□□□ 1.41
CNTNAP3BQ96NU0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CNTNAP3BQ96NU0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CNTNAP3BQ96NU0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CNTNAP3BQ96NU0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CNTNAP3BQ96NU0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CNTNAP3BQ96NU0 AL136116.3-201ENST00000402907 1138 ntBASIC23.85■■□□□ 1.41
CNTNAP3BQ96NU0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CNTNAP3BQ96NU0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.85■■□□□ 1.41
CNTNAP3BQ96NU0 KRT125P-201ENST00000546827 989 ntBASIC23.85■■□□□ 1.41
CNTNAP3BQ96NU0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CNTNAP3BQ96NU0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CNTNAP3BQ96NU0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
CNTNAP3BQ96NU0 AC135983.2-203ENST00000454486 1613 ntBASIC23.84■■□□□ 1.41
CNTNAP3BQ96NU0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.84■■□□□ 1.41
CNTNAP3BQ96NU0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.84■■□□□ 1.41
CNTNAP3BQ96NU0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP3BQ96NU0 AC093536.1-201ENST00000569153 554 ntBASIC23.84■■□□□ 1.41
CNTNAP3BQ96NU0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CNTNAP3BQ96NU0 MIR4787-201ENST00000607364 84 ntBASIC23.84■■□□□ 1.41
CNTNAP3BQ96NU0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.83■■□□□ 1.41
CNTNAP3BQ96NU0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CNTNAP3BQ96NU0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
CNTNAP3BQ96NU0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.83■■□□□ 1.41
CNTNAP3BQ96NU0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CNTNAP3BQ96NU0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.82■■□□□ 1.4
CNTNAP3BQ96NU0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNTNAP3BQ96NU0 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CNTNAP3BQ96NU0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNTNAP3BQ96NU0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CNTNAP3BQ96NU0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CNTNAP3BQ96NU0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.81■■□□□ 1.4
CNTNAP3BQ96NU0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CNTNAP3BQ96NU0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CNTNAP3BQ96NU0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 AC096631.2-201ENST00000436136 790 ntBASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP3BQ96NU0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNTNAP3BQ96NU0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CNTNAP3BQ96NU0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNTNAP3BQ96NU0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CNTNAP3BQ96NU0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.78■■□□□ 1.4
CNTNAP3BQ96NU0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNTNAP3BQ96NU0 AC135279.3-201ENST00000610945 1311 ntBASIC23.78■■□□□ 1.4
CNTNAP3BQ96NU0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CNTNAP3BQ96NU0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CNTNAP3BQ96NU0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.77■■□□□ 1.4
CNTNAP3BQ96NU0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.76■■□□□ 1.39
CNTNAP3BQ96NU0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP3BQ96NU0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP3BQ96NU0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP3BQ96NU0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CNTNAP3BQ96NU0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.75■■□□□ 1.39
CNTNAP3BQ96NU0 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.75■■□□□ 1.39
CNTNAP3BQ96NU0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.75■■□□□ 1.39
CNTNAP3BQ96NU0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP3BQ96NU0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CNTNAP3BQ96NU0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CNTNAP3BQ96NU0 AC133561.4-201ENST00000566112 224 ntBASIC23.74■■□□□ 1.39
CNTNAP3BQ96NU0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.73■■□□□ 1.39
CNTNAP3BQ96NU0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.73■■□□□ 1.39
CNTNAP3BQ96NU0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CNTNAP3BQ96NU0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.72■■□□□ 1.39
CNTNAP3BQ96NU0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.72■■□□□ 1.39
CNTNAP3BQ96NU0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CNTNAP3BQ96NU0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.72■■□□□ 1.39
CNTNAP3BQ96NU0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CNTNAP3BQ96NU0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CNTNAP3BQ96NU0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CNTNAP3BQ96NU0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CNTNAP3BQ96NU0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CNTNAP3BQ96NU0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.7■■□□□ 1.38
CNTNAP3BQ96NU0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.7■■□□□ 1.38
CNTNAP3BQ96NU0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.7■■□□□ 1.38
CNTNAP3BQ96NU0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms