Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.29■■□□□ 1.48
PDLIM5Q96HC4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
PDLIM5Q96HC4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.29■■□□□ 1.48
PDLIM5Q96HC4 HLA-V-202ENST00000446817 847 ntBASIC24.29■■□□□ 1.48
PDLIM5Q96HC4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDLIM5Q96HC4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PDLIM5Q96HC4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.28■■□□□ 1.48
PDLIM5Q96HC4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PDLIM5Q96HC4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PDLIM5Q96HC4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDLIM5Q96HC4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.27■■□□□ 1.48
PDLIM5Q96HC4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.27■■□□□ 1.48
PDLIM5Q96HC4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.26■■□□□ 1.47
PDLIM5Q96HC4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PDLIM5Q96HC4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDLIM5Q96HC4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDLIM5Q96HC4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.25■■□□□ 1.47
PDLIM5Q96HC4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDLIM5Q96HC4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDLIM5Q96HC4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.24■■□□□ 1.47
PDLIM5Q96HC4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.24■■□□□ 1.47
PDLIM5Q96HC4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDLIM5Q96HC4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PDLIM5Q96HC4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PDLIM5Q96HC4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.23■■□□□ 1.47
PDLIM5Q96HC4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PDLIM5Q96HC4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.23■■□□□ 1.47
PDLIM5Q96HC4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.23■■□□□ 1.47
PDLIM5Q96HC4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
PDLIM5Q96HC4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PDLIM5Q96HC4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.22■■□□□ 1.47
PDLIM5Q96HC4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PDLIM5Q96HC4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PDLIM5Q96HC4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.21■■□□□ 1.47
PDLIM5Q96HC4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.21■■□□□ 1.47
PDLIM5Q96HC4 AC091060.1-201ENST00000623524 1766 ntBASIC24.21■■□□□ 1.47
PDLIM5Q96HC4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PDLIM5Q96HC4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PDLIM5Q96HC4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.2■■□□□ 1.46
PDLIM5Q96HC4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
PDLIM5Q96HC4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PDLIM5Q96HC4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.19■■□□□ 1.46
PDLIM5Q96HC4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
PDLIM5Q96HC4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PDLIM5Q96HC4 AC016575.1-201ENST00000607026 382 ntBASIC24.19■■□□□ 1.46
PDLIM5Q96HC4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
PDLIM5Q96HC4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDLIM5Q96HC4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDLIM5Q96HC4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.18■■□□□ 1.46
PDLIM5Q96HC4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.18■■□□□ 1.46
PDLIM5Q96HC4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PDLIM5Q96HC4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.18■■□□□ 1.46
PDLIM5Q96HC4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.18■■□□□ 1.46
PDLIM5Q96HC4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PDLIM5Q96HC4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PDLIM5Q96HC4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDLIM5Q96HC4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.17■■□□□ 1.46
PDLIM5Q96HC4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDLIM5Q96HC4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.17■■□□□ 1.46
PDLIM5Q96HC4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDLIM5Q96HC4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PDLIM5Q96HC4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PDLIM5Q96HC4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PDLIM5Q96HC4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
PDLIM5Q96HC4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.15■■□□□ 1.46
PDLIM5Q96HC4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PDLIM5Q96HC4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PDLIM5Q96HC4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
PDLIM5Q96HC4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.13■■□□□ 1.45
PDLIM5Q96HC4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.13■■□□□ 1.45
PDLIM5Q96HC4 MIR7108-201ENST00000614319 87 ntBASIC24.13■■□□□ 1.45
PDLIM5Q96HC4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDLIM5Q96HC4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDLIM5Q96HC4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.13■■□□□ 1.45
PDLIM5Q96HC4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.13■■□□□ 1.45
PDLIM5Q96HC4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDLIM5Q96HC4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDLIM5Q96HC4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PDLIM5Q96HC4 AL359258.2-201ENST00000564063 1566 ntBASIC24.12■■□□□ 1.45
PDLIM5Q96HC4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDLIM5Q96HC4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.12■■□□□ 1.45
PDLIM5Q96HC4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PDLIM5Q96HC4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDLIM5Q96HC4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDLIM5Q96HC4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.12■■□□□ 1.45
PDLIM5Q96HC4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDLIM5Q96HC4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDLIM5Q96HC4 AC145676.1-201ENST00000514988 2004 ntBASIC24.11■■□□□ 1.45
PDLIM5Q96HC4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PDLIM5Q96HC4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.11■■□□□ 1.45
PDLIM5Q96HC4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDLIM5Q96HC4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PDLIM5Q96HC4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
PDLIM5Q96HC4 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.1■■□□□ 1.45
PDLIM5Q96HC4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PDLIM5Q96HC4 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.1■■□□□ 1.45
PDLIM5Q96HC4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDLIM5Q96HC4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDLIM5Q96HC4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDLIM5Q96HC4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms