Protein–RNA interactions for Protein: Q96A46

SLC25A28, Mitoferrin-2, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A28Q96A46 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC25A28Q96A46 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC25A28Q96A46 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.42■■□□□ 1.02
SLC25A28Q96A46 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.42■■□□□ 1.02
SLC25A28Q96A46 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC25A28Q96A46 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC25A28Q96A46 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC25A28Q96A46 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
SLC25A28Q96A46 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SLC25A28Q96A46 MIR6090-201ENST00000622481 60 ntBASIC21.41■■□□□ 1.02
SLC25A28Q96A46 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC25A28Q96A46 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.4■■□□□ 1.02
SLC25A28Q96A46 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC25A28Q96A46 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC25A28Q96A46 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC25A28Q96A46 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC25A28Q96A46 AP004609.3-201ENST00000610705 1884 ntBASIC21.39■■□□□ 1.02
SLC25A28Q96A46 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SLC25A28Q96A46 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
SLC25A28Q96A46 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.39■■□□□ 1.01
SLC25A28Q96A46 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SLC25A28Q96A46 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC25A28Q96A46 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC25A28Q96A46 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC25A28Q96A46 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC25A28Q96A46 MIR639-201ENST00000384974 98 ntBASIC21.38■■□□□ 1.01
SLC25A28Q96A46 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC25A28Q96A46 MIR4449-201ENST00000578365 66 ntBASIC21.38■■□□□ 1.01
SLC25A28Q96A46 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC25A28Q96A46 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC25A28Q96A46 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC25A28Q96A46 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SLC25A28Q96A46 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC25A28Q96A46 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.37■■□□□ 1.01
SLC25A28Q96A46 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.37■■□□□ 1.01
SLC25A28Q96A46 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.37■■□□□ 1.01
SLC25A28Q96A46 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC25A28Q96A46 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC25A28Q96A46 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.36■■□□□ 1.01
SLC25A28Q96A46 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC25A28Q96A46 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC25A28Q96A46 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC25A28Q96A46 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC25A28Q96A46 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.35■■□□□ 1.01
SLC25A28Q96A46 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC25A28Q96A46 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.34■■□□□ 1.01
SLC25A28Q96A46 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC25A28Q96A46 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC25A28Q96A46 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC25A28Q96A46 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC25A28Q96A46 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SLC25A28Q96A46 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SLC25A28Q96A46 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.33■■□□□ 1.01
SLC25A28Q96A46 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.33■■□□□ 1
SLC25A28Q96A46 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.32■■□□□ 1
SLC25A28Q96A46 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC25A28Q96A46 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC25A28Q96A46 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.32■■□□□ 1
SLC25A28Q96A46 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.32■■□□□ 1
SLC25A28Q96A46 LINC01971-201ENST00000617888 1048 ntBASIC21.32■■□□□ 1
SLC25A28Q96A46 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC25A28Q96A46 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SLC25A28Q96A46 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SLC25A28Q96A46 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC25A28Q96A46 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC25A28Q96A46 MIR3648-2-201ENST00000581792 180 ntBASIC21.31■■□□□ 1
SLC25A28Q96A46 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.31■■□□□ 1
SLC25A28Q96A46 MIR3648-1-201ENST00000615959 180 ntBASIC21.31■■□□□ 1
SLC25A28Q96A46 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.31■■□□□ 1
SLC25A28Q96A46 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC25A28Q96A46 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC25A28Q96A46 AC016575.1-201ENST00000607026 382 ntBASIC21.3■■□□□ 1
SLC25A28Q96A46 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC25A28Q96A46 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC25A28Q96A46 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.3■■□□□ 1
SLC25A28Q96A46 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC25A28Q96A46 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC25A28Q96A46 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SLC25A28Q96A46 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SLC25A28Q96A46 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SLC25A28Q96A46 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC25A28Q96A46 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.29■■□□□ 1
SLC25A28Q96A46 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC25A28Q96A46 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SLC25A28Q96A46 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC25A28Q96A46 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SLC25A28Q96A46 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.28■■□□□ 1
SLC25A28Q96A46 DUX4L11-201ENST00000611504 1267 ntBASIC21.28■■□□□ 1
SLC25A28Q96A46 DUX4L12-201ENST00000614593 1267 ntBASIC21.28■■□□□ 1
SLC25A28Q96A46 DUX4L14-201ENST00000621227 1267 ntBASIC21.28■■□□□ 1
SLC25A28Q96A46 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.28■■□□□ 1
SLC25A28Q96A46 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.28■■□□□ 1
SLC25A28Q96A46 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.27■■□□□ 1
SLC25A28Q96A46 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC25A28Q96A46 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SLC25A28Q96A46 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
SLC25A28Q96A46 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SLC25A28Q96A46 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SLC25A28Q96A46 AC142472.1-201ENST00000612013 1741 ntBASIC21.26■□□□□ 0.99
SLC25A28Q96A46 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms