Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.61■■□□□ 1.05
CPEB3Q8NE35 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPEB3Q8NE35 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.61■■□□□ 1.05
CPEB3Q8NE35 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPEB3Q8NE35 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPEB3Q8NE35 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPEB3Q8NE35 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CPEB3Q8NE35 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPEB3Q8NE35 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPEB3Q8NE35 AL359258.2-201ENST00000564063 1566 ntBASIC21.57■■□□□ 1.04
CPEB3Q8NE35 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPEB3Q8NE35 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPEB3Q8NE35 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPEB3Q8NE35 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPEB3Q8NE35 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.56■■□□□ 1.04
CPEB3Q8NE35 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.56■■□□□ 1.04
CPEB3Q8NE35 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.56■■□□□ 1.04
CPEB3Q8NE35 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.54■■□□□ 1.04
CPEB3Q8NE35 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.53■■□□□ 1.04
CPEB3Q8NE35 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.53■■□□□ 1.04
CPEB3Q8NE35 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.53■■□□□ 1.04
CPEB3Q8NE35 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPEB3Q8NE35 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CPEB3Q8NE35 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPEB3Q8NE35 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPEB3Q8NE35 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 AP004609.3-201ENST00000610705 1884 ntBASIC21.51■■□□□ 1.03
CPEB3Q8NE35 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 AC126177.7-201ENST00000547904 679 ntBASIC21.5■■□□□ 1.03
CPEB3Q8NE35 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
CPEB3Q8NE35 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CPEB3Q8NE35 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.48■■□□□ 1.03
CPEB3Q8NE35 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPEB3Q8NE35 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.48■■□□□ 1.03
CPEB3Q8NE35 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPEB3Q8NE35 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 AC060814.1-201ENST00000554326 538 ntBASIC21.47■■□□□ 1.03
CPEB3Q8NE35 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms