Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC9CQ8N5M4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TTC9CQ8N5M4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.51■□□□□ 0.71
TTC9CQ8N5M4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC9CQ8N5M4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TTC9CQ8N5M4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC9CQ8N5M4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.5■□□□□ 0.71
TTC9CQ8N5M4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TTC9CQ8N5M4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TTC9CQ8N5M4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.49■□□□□ 0.71
TTC9CQ8N5M4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.49■□□□□ 0.71
TTC9CQ8N5M4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TTC9CQ8N5M4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.49■□□□□ 0.71
TTC9CQ8N5M4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
TTC9CQ8N5M4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC9CQ8N5M4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.48■□□□□ 0.71
TTC9CQ8N5M4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TTC9CQ8N5M4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TTC9CQ8N5M4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 AP004609.3-201ENST00000610705 1884 ntBASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC9CQ8N5M4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TTC9CQ8N5M4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC9CQ8N5M4 AC142472.1-201ENST00000612013 1741 ntBASIC19.45■□□□□ 0.7
TTC9CQ8N5M4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TTC9CQ8N5M4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TTC9CQ8N5M4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC9CQ8N5M4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC9CQ8N5M4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.44■□□□□ 0.7
TTC9CQ8N5M4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC9CQ8N5M4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TTC9CQ8N5M4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC9CQ8N5M4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TTC9CQ8N5M4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.42■□□□□ 0.7
TTC9CQ8N5M4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC9CQ8N5M4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TTC9CQ8N5M4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.42■□□□□ 0.7
TTC9CQ8N5M4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC9CQ8N5M4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.41■□□□□ 0.7
TTC9CQ8N5M4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.41■□□□□ 0.7
TTC9CQ8N5M4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.41■□□□□ 0.7
TTC9CQ8N5M4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC9CQ8N5M4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 MIR639-201ENST00000384974 98 ntBASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 AL359258.2-201ENST00000564063 1566 ntBASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TTC9CQ8N5M4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TTC9CQ8N5M4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.39■□□□□ 0.7
TTC9CQ8N5M4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TTC9CQ8N5M4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.39■□□□□ 0.69
TTC9CQ8N5M4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.39■□□□□ 0.69
TTC9CQ8N5M4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC9CQ8N5M4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TTC9CQ8N5M4 AC126177.7-201ENST00000547904 679 ntBASIC19.38■□□□□ 0.69
TTC9CQ8N5M4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC9CQ8N5M4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.37■□□□□ 0.69
TTC9CQ8N5M4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC9CQ8N5M4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms