Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.42■■■□□ 2.78
PROM2Q8N271 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC32.41■■■□□ 2.78
PROM2Q8N271 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
PROM2Q8N271 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC32.41■■■□□ 2.78
PROM2Q8N271 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
PROM2Q8N271 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.41■■■□□ 2.78
PROM2Q8N271 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC32.4■■■□□ 2.78
PROM2Q8N271 HYI-210ENST00000486909 905 ntTSL 5 BASIC32.4■■■□□ 2.78
PROM2Q8N271 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC32.4■■■□□ 2.78
PROM2Q8N271 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC32.4■■■□□ 2.78
PROM2Q8N271 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
PROM2Q8N271 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PROM2Q8N271 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC32.39■■■□□ 2.78
PROM2Q8N271 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC32.39■■■□□ 2.78
PROM2Q8N271 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PROM2Q8N271 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
PROM2Q8N271 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
PROM2Q8N271 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.37■■■□□ 2.77
PROM2Q8N271 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
PROM2Q8N271 AC008406.3-201ENST00000620001 1374 ntBASIC32.37■■■□□ 2.77
PROM2Q8N271 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
PROM2Q8N271 AC018755.3-202ENST00000596210 929 ntBASIC32.37■■■□□ 2.77
PROM2Q8N271 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PROM2Q8N271 AC239859.2-201ENST00000444165 318 ntBASIC32.36■■■□□ 2.77
PROM2Q8N271 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PROM2Q8N271 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PROM2Q8N271 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
PROM2Q8N271 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
PROM2Q8N271 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
PROM2Q8N271 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PROM2Q8N271 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC32.35■■■□□ 2.77
PROM2Q8N271 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
PROM2Q8N271 PFN2-211ENST00000489155 636 ntTSL 4 BASIC32.34■■■□□ 2.77
PROM2Q8N271 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PROM2Q8N271 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC32.34■■■□□ 2.77
PROM2Q8N271 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
PROM2Q8N271 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
PROM2Q8N271 IDNK-203ENST00000405990 629 ntTSL 2 BASIC32.33■■■□□ 2.77
PROM2Q8N271 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
PROM2Q8N271 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
PROM2Q8N271 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.32■■■□□ 2.76
PROM2Q8N271 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC32.31■■■□□ 2.76
PROM2Q8N271 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC32.31■■■□□ 2.76
PROM2Q8N271 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
PROM2Q8N271 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.31■■■□□ 2.76
PROM2Q8N271 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.31■■■□□ 2.76
PROM2Q8N271 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PROM2Q8N271 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
PROM2Q8N271 PEMT-206ENST00000435340 960 ntTSL 5 BASIC32.3■■■□□ 2.76
PROM2Q8N271 RNF146-205ENST00000477776 762 ntTSL 3 BASIC32.3■■■□□ 2.76
PROM2Q8N271 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PROM2Q8N271 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC32.29■■■□□ 2.76
PROM2Q8N271 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
PROM2Q8N271 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC32.29■■■□□ 2.76
PROM2Q8N271 CREM-229ENST00000474362 1030 ntTSL 2 BASIC32.28■■■□□ 2.76
PROM2Q8N271 MIR3960-201ENST00000583311 91 ntBASIC32.28■■■□□ 2.76
PROM2Q8N271 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PROM2Q8N271 MIR638-201ENST00000385237 100 ntBASIC32.27■■■□□ 2.76
PROM2Q8N271 MTX2-204ENST00000443241 799 ntTSL 3 BASIC32.27■■■□□ 2.76
PROM2Q8N271 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
PROM2Q8N271 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PROM2Q8N271 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
PROM2Q8N271 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
PROM2Q8N271 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PROM2Q8N271 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC32.24■■■□□ 2.75
PROM2Q8N271 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
PROM2Q8N271 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC32.23■■■□□ 2.75
PROM2Q8N271 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
PROM2Q8N271 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC32.21■■■□□ 2.75
PROM2Q8N271 GRAMD4P7-201ENST00000578182 1232 ntBASIC32.21■■■□□ 2.75
PROM2Q8N271 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
PROM2Q8N271 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
PROM2Q8N271 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
PROM2Q8N271 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC32.2■■■□□ 2.75
PROM2Q8N271 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
PROM2Q8N271 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PROM2Q8N271 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC32.18■■■□□ 2.74
PROM2Q8N271 Z92544.1-202ENST00000571933 1220 ntBASIC32.18■■■□□ 2.74
PROM2Q8N271 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
PROM2Q8N271 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
PROM2Q8N271 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PROM2Q8N271 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC32.15■■■□□ 2.74
PROM2Q8N271 AC019171.1-201ENST00000601251 1056 ntBASIC32.15■■■□□ 2.74
PROM2Q8N271 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
PROM2Q8N271 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
PROM2Q8N271 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
PROM2Q8N271 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PROM2Q8N271 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
PROM2Q8N271 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
PROM2Q8N271 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
PROM2Q8N271 TK2-216ENST00000564917 1156 ntTSL 3 BASIC32.12■■■□□ 2.73
PROM2Q8N271 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC32.12■■■□□ 2.73
PROM2Q8N271 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
PROM2Q8N271 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
PROM2Q8N271 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC32.11■■■□□ 2.73
PROM2Q8N271 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PROM2Q8N271 AC100797.4-201ENST00000631653 1827 ntBASIC32.1■■■□□ 2.73
PROM2Q8N271 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
PROM2Q8N271 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC32.1■■■□□ 2.73
PROM2Q8N271 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC32.1■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 415.7 ms