Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 GUSBP5-201ENST00000418136 578 ntBASIC26.27■■□□□ 1.8
RNF135Q8IUD6 DUX4L9-201ENST00000449051 1259 ntBASIC26.27■■□□□ 1.8
RNF135Q8IUD6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.27■■□□□ 1.8
RNF135Q8IUD6 AC074183.2-201ENST00000623112 922 ntBASIC26.27■■□□□ 1.8
RNF135Q8IUD6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RNF135Q8IUD6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RNF135Q8IUD6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RNF135Q8IUD6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RNF135Q8IUD6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RNF135Q8IUD6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RNF135Q8IUD6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
RNF135Q8IUD6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.26■■□□□ 1.79
RNF135Q8IUD6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNF135Q8IUD6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
RNF135Q8IUD6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RNF135Q8IUD6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.25■■□□□ 1.79
RNF135Q8IUD6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNF135Q8IUD6 AC026202.3-201ENST00000600805 1127 ntBASIC26.25■■□□□ 1.79
RNF135Q8IUD6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNF135Q8IUD6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.24■■□□□ 1.79
RNF135Q8IUD6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.24■■□□□ 1.79
RNF135Q8IUD6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.24■■□□□ 1.79
RNF135Q8IUD6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF135Q8IUD6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF135Q8IUD6 YBX1P4-201ENST00000392794 808 ntBASIC26.23■■□□□ 1.79
RNF135Q8IUD6 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.23■■□□□ 1.79
RNF135Q8IUD6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RNF135Q8IUD6 SMPD5-203ENST00000639008 1464 ntBASIC26.23■■□□□ 1.79
RNF135Q8IUD6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.22■■□□□ 1.79
RNF135Q8IUD6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNF135Q8IUD6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
RNF135Q8IUD6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RNF135Q8IUD6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.21■■□□□ 1.79
RNF135Q8IUD6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNF135Q8IUD6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNF135Q8IUD6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RNF135Q8IUD6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNF135Q8IUD6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNF135Q8IUD6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
RNF135Q8IUD6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RNF135Q8IUD6 AC103834.1-201ENST00000520383 144 ntBASIC26.2■■□□□ 1.78
RNF135Q8IUD6 AL139393.2-201ENST00000608721 2025 ntBASIC26.2■■□□□ 1.78
RNF135Q8IUD6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RNF135Q8IUD6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
RNF135Q8IUD6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF135Q8IUD6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF135Q8IUD6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF135Q8IUD6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
RNF135Q8IUD6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.19■■□□□ 1.78
RNF135Q8IUD6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.18■■□□□ 1.78
RNF135Q8IUD6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RNF135Q8IUD6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.18■■□□□ 1.78
RNF135Q8IUD6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.18■■□□□ 1.78
RNF135Q8IUD6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.18■■□□□ 1.78
RNF135Q8IUD6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
RNF135Q8IUD6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
RNF135Q8IUD6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.17■■□□□ 1.78
RNF135Q8IUD6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
RNF135Q8IUD6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
RNF135Q8IUD6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF135Q8IUD6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
RNF135Q8IUD6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.16■■□□□ 1.78
RNF135Q8IUD6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNF135Q8IUD6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RNF135Q8IUD6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.15■■□□□ 1.78
RNF135Q8IUD6 AC139795.1-202ENST00000500444 432 ntBASIC26.15■■□□□ 1.78
RNF135Q8IUD6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.15■■□□□ 1.78
RNF135Q8IUD6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
RNF135Q8IUD6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.15■■□□□ 1.78
RNF135Q8IUD6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNF135Q8IUD6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.14■■□□□ 1.78
RNF135Q8IUD6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNF135Q8IUD6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.14■■□□□ 1.78
RNF135Q8IUD6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.14■■□□□ 1.78
RNF135Q8IUD6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.14■■□□□ 1.78
RNF135Q8IUD6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RNF135Q8IUD6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF135Q8IUD6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF135Q8IUD6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF135Q8IUD6 AL356441.2-201ENST00000443009 864 ntBASIC26.13■■□□□ 1.77
RNF135Q8IUD6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.13■■□□□ 1.77
RNF135Q8IUD6 SPCS2P3-201ENST00000500401 656 ntBASIC26.13■■□□□ 1.77
RNF135Q8IUD6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF135Q8IUD6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.13■■□□□ 1.77
RNF135Q8IUD6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF135Q8IUD6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF135Q8IUD6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RNF135Q8IUD6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
RNF135Q8IUD6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RNF135Q8IUD6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.11■■□□□ 1.77
RNF135Q8IUD6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF135Q8IUD6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF135Q8IUD6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.09■■□□□ 1.77
RNF135Q8IUD6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
RNF135Q8IUD6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF135Q8IUD6 PVT1_1.1-201ENST00000615125 194 ntBASIC26.09■■□□□ 1.77
RNF135Q8IUD6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF135Q8IUD6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.08■■□□□ 1.77
RNF135Q8IUD6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
RNF135Q8IUD6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms