Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
FOXG1P55316 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXG1P55316 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
FOXG1P55316 AC092296.2-201ENST00000589470 999 ntBASIC21.83■■□□□ 1.09
FOXG1P55316 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
FOXG1P55316 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
FOXG1P55316 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXG1P55316 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXG1P55316 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXG1P55316 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.82■■□□□ 1.08
FOXG1P55316 AC126177.7-201ENST00000547904 679 ntBASIC21.82■■□□□ 1.08
FOXG1P55316 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXG1P55316 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
FOXG1P55316 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXG1P55316 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FOXG1P55316 AL449106.1-201ENST00000608517 1980 ntBASIC21.81■■□□□ 1.08
FOXG1P55316 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FOXG1P55316 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.81■■□□□ 1.08
FOXG1P55316 RNF126P1-201ENST00000567452 1320 ntBASIC21.8■■□□□ 1.08
FOXG1P55316 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXG1P55316 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
FOXG1P55316 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXG1P55316 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
FOXG1P55316 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXG1P55316 RARRES2P2-201ENST00000394842 485 ntBASIC21.8■■□□□ 1.08
FOXG1P55316 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXG1P55316 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXG1P55316 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXG1P55316 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXG1P55316 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXG1P55316 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXG1P55316 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXG1P55316 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXG1P55316 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.79■■□□□ 1.08
FOXG1P55316 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.78■■□□□ 1.08
FOXG1P55316 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXG1P55316 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXG1P55316 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXG1P55316 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FOXG1P55316 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.77■■□□□ 1.08
FOXG1P55316 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.77■■□□□ 1.07
FOXG1P55316 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXG1P55316 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXG1P55316 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXG1P55316 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXG1P55316 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.75■■□□□ 1.07
FOXG1P55316 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
FOXG1P55316 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
FOXG1P55316 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.75■■□□□ 1.07
FOXG1P55316 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.74■■□□□ 1.07
FOXG1P55316 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
FOXG1P55316 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.74■■□□□ 1.07
FOXG1P55316 ECEL1P2-201ENST00000461596 1295 ntBASIC21.74■■□□□ 1.07
FOXG1P55316 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
FOXG1P55316 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXG1P55316 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXG1P55316 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXG1P55316 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
FOXG1P55316 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.72■■□□□ 1.07
FOXG1P55316 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXG1P55316 AL359504.2-201ENST00000605506 1601 ntBASIC21.72■■□□□ 1.07
FOXG1P55316 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
FOXG1P55316 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.71■■□□□ 1.07
FOXG1P55316 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXG1P55316 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXG1P55316 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
FOXG1P55316 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.7■■□□□ 1.07
FOXG1P55316 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXG1P55316 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXG1P55316 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXG1P55316 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXG1P55316 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXG1P55316 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.69■■□□□ 1.06
FOXG1P55316 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXG1P55316 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXG1P55316 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXG1P55316 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXG1P55316 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXG1P55316 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXG1P55316 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXG1P55316 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXG1P55316 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXG1P55316 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXG1P55316 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.67■■□□□ 1.06
FOXG1P55316 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXG1P55316 SMPD5-203ENST00000639008 1464 ntBASIC21.66■■□□□ 1.06
FOXG1P55316 AC025884.2-201ENST00000553429 711 ntBASIC21.66■■□□□ 1.06
FOXG1P55316 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXG1P55316 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
FOXG1P55316 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXG1P55316 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXG1P55316 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXG1P55316 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXG1P55316 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.65■■□□□ 1.06
FOXG1P55316 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
FOXG1P55316 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXG1P55316 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXG1P55316 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.64■■□□□ 1.06
FOXG1P55316 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXG1P55316 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms