Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.63■■□□□ 1.37
CPNE3O75131 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CPNE3O75131 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.63■■□□□ 1.37
CPNE3O75131 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.62■■□□□ 1.37
CPNE3O75131 SMPD5-203ENST00000639008 1464 ntBASIC23.62■■□□□ 1.37
CPNE3O75131 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CPNE3O75131 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CPNE3O75131 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CPNE3O75131 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CPNE3O75131 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CPNE3O75131 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.61■■□□□ 1.37
CPNE3O75131 KRT18P60-201ENST00000312876 1297 ntBASIC23.61■■□□□ 1.37
CPNE3O75131 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CPNE3O75131 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.61■■□□□ 1.37
CPNE3O75131 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE3O75131 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.6■■□□□ 1.37
CPNE3O75131 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE3O75131 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.6■■□□□ 1.37
CPNE3O75131 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE3O75131 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CPNE3O75131 AL033527.3-201ENST00000566366 1196 ntBASIC23.59■■□□□ 1.37
CPNE3O75131 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPNE3O75131 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPNE3O75131 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CPNE3O75131 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.57■■□□□ 1.36
CPNE3O75131 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE3O75131 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE3O75131 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPNE3O75131 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPNE3O75131 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
CPNE3O75131 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPNE3O75131 TSPY13P-201ENST00000338964 914 ntBASIC23.56■■□□□ 1.36
CPNE3O75131 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CPNE3O75131 AC025884.2-201ENST00000553429 711 ntBASIC23.55■■□□□ 1.36
CPNE3O75131 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.55■■□□□ 1.36
CPNE3O75131 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPNE3O75131 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.55■■□□□ 1.36
CPNE3O75131 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
CPNE3O75131 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPNE3O75131 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CPNE3O75131 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.54■■□□□ 1.36
CPNE3O75131 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CPNE3O75131 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.54■■□□□ 1.36
CPNE3O75131 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.53■■□□□ 1.36
CPNE3O75131 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPNE3O75131 AC004987.1-201ENST00000428627 508 ntBASIC23.53■■□□□ 1.36
CPNE3O75131 ATP5G2P3-201ENST00000429083 425 ntBASIC23.53■■□□□ 1.36
CPNE3O75131 AC133552.2-201ENST00000619106 1032 ntBASIC23.53■■□□□ 1.36
CPNE3O75131 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPNE3O75131 AC009831.1-201ENST00000580420 1582 ntBASIC23.52■■□□□ 1.36
CPNE3O75131 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CPNE3O75131 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CPNE3O75131 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.52■■□□□ 1.36
CPNE3O75131 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CPNE3O75131 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.52■■□□□ 1.36
CPNE3O75131 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.52■■□□□ 1.36
CPNE3O75131 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.52■■□□□ 1.36
CPNE3O75131 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CPNE3O75131 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE3O75131 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE3O75131 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE3O75131 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE3O75131 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.51■■□□□ 1.35
CPNE3O75131 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.51■■□□□ 1.35
CPNE3O75131 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CPNE3O75131 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CPNE3O75131 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.51■■□□□ 1.35
CPNE3O75131 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CPNE3O75131 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPNE3O75131 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPNE3O75131 RP9P-202ENST00000450133 1212 ntBASIC23.5■■□□□ 1.35
CPNE3O75131 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPNE3O75131 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CPNE3O75131 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPNE3O75131 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CPNE3O75131 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPNE3O75131 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPNE3O75131 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPNE3O75131 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.49■■□□□ 1.35
CPNE3O75131 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CPNE3O75131 AL592293.1-201ENST00000502889 1188 ntBASIC23.49■■□□□ 1.35
CPNE3O75131 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CPNE3O75131 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPNE3O75131 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPNE3O75131 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPNE3O75131 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPNE3O75131 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.48■■□□□ 1.35
CPNE3O75131 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CPNE3O75131 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CPNE3O75131 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CPNE3O75131 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
CPNE3O75131 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE3O75131 MIR3960-201ENST00000583311 91 ntBASIC23.47■■□□□ 1.35
CPNE3O75131 AC026202.3-201ENST00000600805 1127 ntBASIC23.47■■□□□ 1.35
CPNE3O75131 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPNE3O75131 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CPNE3O75131 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CPNE3O75131 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.46■■□□□ 1.35
CPNE3O75131 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CPNE3O75131 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms